chr1.trna1 (16725566-16725638) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (16725599-16725601) Score: 24.9 Filtered: HMM Sc=18.80 Sec struct Sc=6.10 * | * | * | * | * | * | * | Seq: GTTTCTGTAGTATAGTGGTtATCATGTTTGCCTCACATGTGAAAGAcCCTTGGCTCGAGACTGGAGGGAAACA Str: >>>>>>...>>............<<.>>>>>.......<<<<<......>>>>.......<<<<..<<<<<<. chr1.trna2 (16727285-16727355) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (16727317-16727319) Score: 56.3 Filtered: HMM Sc=54.00 Sec struct Sc=2.30 * | * | * | * | * | * | * | Seq: GCCTTGGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGaCCCGGGTTCAATTCCCGGCCAATGCA Str: >>.>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<.<<. chr1.trna3 (16860198-16860270) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (16860231-16860233) Score: 27.2 Filtered, Possible pseudogene: HMM Sc=26.90 Sec struct Sc=0.30 * | * | * | * | * | * | * | Seq: GTTTCTGTGGTGTAGTGGTtATTATGTTCGCTTCACATATGAAAGGtCTCTGGTTCGAGACTGCGTGGGAACA Str: >>>>>>>..>>>..........<<<.>>>>.........<<<<.....>.>>>.......<<<.<<<<<<<<. chr1.trna4 (16861921-16861991) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (16861953-16861955) Score: 78.3 HMM Sc=56.60 Sec struct Sc=21.70 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGaCCCGGGTTCAATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna5 (16872583-16872654) Length: 72 bp Type: Glu Anticodon: TTC at 34-36 (16872616-16872618) Score: 71.6 HMM Sc=44.70 Sec struct Sc=26.90 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGCtAGGATTCGGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGGCCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna6 (16875463-16875536) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (16875497-16875499) Score: 52.0 Filtered: HMM Sc=42.90 Sec struct Sc=9.10 * | * | * | * | * | * | * | Seq: GTCTCTGTGGTGCAATCGGTtAGCGCGTTCGGCTGTTAACCATAAGGtTGGTGGTTAGAGACCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>..>>.......<<..<.....>>>>>.......<<<<<<<<<<<<. chr1.trna7 (16889677-16889750) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (16889711-16889713) Score: 77.7 HMM Sc=51.90 Sec struct Sc=25.80 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAGAtTGGTGGTTCGAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna8 (39504520-39504595) Length: 76 bp Type: Lys Anticodon: CTT at 37-39 (39504556-39504558) Score: 48.3 Filtered, Possible pseudogene: HMM Sc=53.50 Sec struct Sc=-5.20 * | * | * | * | * | * | * | * Seq: GCCacCAGCaTGTCTCAGTCGGTATAGTGTGAGACTCTTAATCTCAGGGtCGTGGGTTCAAGCCCCACATTGGGCG Str: >>>..>>>.....>>..........<<..>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<<<. chr1.trna9 (93847573-93847657) Length: 85 bp Type: Arg Anticodon: TCT at 34-36 (93847606-93847608) Score: 71.1 Possible intron: 38-49 (93847610-93847621) HMM Sc=51.20 Sec struct Sc=19.90 * | * | * | * | * | * | * | * | Seq: GGCTCCGTGGCGCAATGGAtAGCGCATTGGACTTCTAgaggctgaaggcATTCAAAGGtTCCGGGTTCGAGTCCCGGCGGAGTCG Str: >>>>>>>..>>>>........<<<<.>>>>>...................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna10 (120945289-120945362) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (120945323-120945325) Score: 46.1 Filtered: HMM Sc=37.70 Sec struct Sc=8.40 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTTGACTGTTAACTGAAAGGtTGGTGGTGCAAGCCCATCCAGGGATG Str: >>>>>>>..>>>>.........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna11 (143584701-143584772) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (143584734-143584736) Score: 35.7 Filtered, Possible pseudogene: HMM Sc=36.40 Sec struct Sc=-0.70 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTgAGGGCTTTGGACTCTGACTACAGTGaTCAGAGTTCAAGTCTCAGTGGGACCT Str: >>>>>>>..>>.>........<.<<.>>>.>.......<.<<<....>.>>>.......<<<.<<<<<<<<. chr1.trna12 (143691474-143691545) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (143691507-143691509) Score: 71.9 HMM Sc=44.40 Sec struct Sc=27.50 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTaAGCACTCTGGACTCTGAATCCAGCGaTCCGAGTTCGAGTCTCGGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna13 (144419267-144419340) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (144419301-144419303) Score: 79.7 HMM Sc=53.90 Sec struct Sc=25.80 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCATTCGGCTGTTAACCGAAAGGtTGGTGGTTCGAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna14 (145129239-145129312) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (145129273-145129275) Score: 62.7 HMM Sc=47.40 Sec struct Sc=15.30 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGCtAGCGCGTTTGGCTGTTAACTAAAAGGtTGGCGGTTCGAACCCACCCAGAGGCG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<. chr1.trna15 (145157157-145157229) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (145157190-145157192) Score: 59.3 HMM Sc=38.80 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCATGTTCGCCTCACACGCGAAAGGtCCCCGGTTCGAAACTGGATGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<<<<. chr1.trna16 (145161108-145161178) Length: 71 bp Type: Val Anticodon: CAC at 33-35 (145161140-145161142) Score: 58.1 Filtered: HMM Sc=60.20 Sec struct Sc=-2.10 * | * | * | * | * | * | * | Seq: GCACTGGTGGTTCAGTGGTAGGGTTCTCGCCTCACACGCGGGAGaCCCGGGTTCAATTCCCGGTCAAGGCA Str: >>..>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<..<<. chr1.trna17 (145168404-145168483) Length: 80 bp Type: Phe Anticodon: GAA at 42-44 (145168445-145168447) Score: 32.2 Filtered, Possible pseudogene: HMM Sc=29.00 Sec struct Sc=3.20 * | * | * | * | * | * | * | * Seq: TCCgCatctgcaTGGTTGTCTAGTGGCtAGGATTCGGTGCTGAAAGCGCCACGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>.>.......>>>..>>>>........<<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna18 (145171264-145171337) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (145171298-145171300) Score: 42.4 Filtered: HMM Sc=35.20 Sec struct Sc=7.20 * | * | * | * | * | * | * | Seq: ATCTCCGTGGAGCAATTGGTtAGCGCGTTCGGCTGTTAACCGGAAAGtTGGTGGTTCGAGCCTACCCAGGGACG Str: .>>>>.>..>.>>.........<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<.. chr1.trna19 (145176939-145177011) Length: 73 bp Type: Glu Anticodon: TTC at 34-36 (145176972-145176974) Score: 28.2 Filtered, Possible pseudogene: HMM Sc=28.30 Sec struct Sc=-0.10 * | * | * | * | * | * | * | Seq: TCCGTGGTGGTCTAGTGGCtAGGATTCGGCGCTTTCACCGCCTGCAGCTCGAGTTCGATTCCTGGTCAGGGAA Str: >>>.>>>..>>>>........<<<<..>>>>.......<<<<......>>>.>.......<.<<<<<<.<<<. chr1.trna20 (145287766-145287839) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (145287800-145287802) Score: 80.9 HMM Sc=55.20 Sec struct Sc=25.70 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAGGtTGGTGGTTCGAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna21 (145437598-145437668) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (145437630-145437632) Score: 20.3 Filtered, Possible pseudogene: HMM Sc=17.10 Sec struct Sc=3.20 * | * | * | * | * | * | * | Seq: GCGTTGGCAGTTCAGTGGTACAATTCTCGCCTCCCACCCGGGAGaCCTGGATTCCATTTCCGGCAAATGCA Str: >>>>>.>..>>>.........<<<.>>>>.........<<<<....>>>>>.......<<<<<<.<<<<<. chr1.trna22 (145459658-145459729) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (145459691-145459693) Score: 71.9 HMM Sc=44.40 Sec struct Sc=27.50 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTgAGCACTCTGGACTCTGAATCCAGCGaTCCGAGTTCGAGTCTCGGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna23 (145563246-145563317) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (145563279-145563281) Score: 45.2 Filtered: HMM Sc=35.20 Sec struct Sc=10.00 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTgAGCACTTTGGACTCTGAATACAGTGaTCAGAGTTCAAGTCTCACTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<......>>>.......<<<..<<<<<<<. chr1.trna24 (146035692-146035763) Length: 72 bp Type: Glu Anticodon: CTC at 34-36 (146035725-146035727) Score: 73.2 HMM Sc=49.00 Sec struct Sc=24.20 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGTtAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna25 (146037061-146037132) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (146037094-146037096) Score: 73.8 HMM Sc=49.30 Sec struct Sc=24.50 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTATAGTGGTgAGCATAGCTGCCTTCCAAGCAGTTGaCCCGGGTTCGATTCCCGGCCAACGCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna26 (146038044-146038115) Length: 72 bp Type: His Anticodon: GTG at 34-36 (146038077-146038079) Score: 60.1 HMM Sc=29.80 Sec struct Sc=30.30 * | * | * | * | * | * | * | Seq: GCCGTGATCGTATAGTGGTtAGTACTCTGCGTTGTGGCCGCAGCAaCCTCGGTTCGAATCCGAGTCACGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna27 (146039401-146039473) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (146039434-146039436) Score: 87.8 HMM Sc=68.80 Sec struct Sc=19.00 * | * | * | * | * | * | * | Seq: GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGtCGTGGGTTCGAGCCCCACGTTGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna28 (146055612-146055683) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (146055645-146055647) Score: 44.7 Filtered: HMM Sc=36.50 Sec struct Sc=8.20 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTgAGCACTTTGGACTCTGAATACAGTGaTCAGAGTTCAAGTCTCACTGGGACCT Str: >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<......>>>.......<<<..<<<<<<<. chr1.trna29 (146370101-146370174) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (146370135-146370137) Score: 67.9 HMM Sc=46.20 Sec struct Sc=21.70 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGCAAGGtTGGTGGTTCCAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>.>>>.......<<<.<.....>>>>>.......<<<<<<<<<<<<. chr1.trna30 (146394195-146394268) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (146394229-146394231) Score: 47.0 Filtered: HMM Sc=39.60 Sec struct Sc=7.40 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCACAATCGGTtAGCGCGTTTGGCTGTTAATCTAAAGTtTGGTGGTTAGAGCCCACTGAGGGACG Str: >>>>>>...>>.>.........<.<<.>>.>>.......<<.<<.....>>>>>.......<<<<<.<<<<<<. chr1.trna31 (146488866-146488936) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (146488898-146488900) Score: 35.0 Filtered, Possible pseudogene: HMM Sc=33.80 Sec struct Sc=1.20 * | * | * | * | * | * | * | Seq: GCGTCAGTGGTTTAGTGGTGGAATTCCTGCCTCCCATGCACGAGaTCCGTGTTCAACTCCTGGTTGGTGCA Str: >>>>>>>..>>>>.......<<<<.>.>>>.......<<<.<....>>>.>.......<.<<<<<<<<<<. chr1.trna32 (147073225-147073296) Length: 72 bp Type: His Anticodon: GTG at 34-36 (147073258-147073260) Score: 60.1 HMM Sc=29.80 Sec struct Sc=30.30 * | * | * | * | * | * | * | Seq: GCCGTGATCGTATAGTGGTtAGTACTCTGCGTTGTGGCCGCAGCAaCCTCGGTTCGAATCCGAGTCACGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna33 (148011059-148011129) Length: 71 bp Type: Arg Anticodon: CCT at 33-35 (148011091-148011093) Score: 23.8 Filtered, Possible pseudogene: HMM Sc=29.60 Sec struct Sc=-5.80 * | * | * | * | * | * | * | Seq: GCATTGGTAGTTCAGCGGTGGCATTCTCCCCACCTACGCGGGAGaCCTGGGTTCAACTCCCGGCCAAAGCA Str: >>.>>>>..>>.>.......<.<<.>>>.>.......<.<<<....>>>>>.......<<<<<<<<<.<<. chr1.trna34 (148020474-148020544) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (148020506-148020508) Score: 27.6 Filtered, Possible pseudogene: HMM Sc=23.80 Sec struct Sc=3.80 * | * | * | * | * | * | * | Seq: GCGTTGGCAGTTCAGTGGTAGAATTCTCGCCTCCCACCCGGGAGaCCTGGATTCCATTTCCGGCAAATGCA Str: >>>>>.>..>>>>.......<<<<.>>>>.........<<<<....>>>>>.......<<<<<<.<<<<<. chr1.trna35 (148032790-148032861) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (148032823-148032825) Score: 71.9 HMM Sc=44.40 Sec struct Sc=27.50 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTgAGCACTCTGGACTCTGAATCCAGCGaTCCGAGTTCGAGTCTCGGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna36 (148246758-148246831) Length: 74 bp Type: Asn Anticodon: ATT at 35-37 (148246792-148246794) Score: 47.8 Filtered: HMM Sc=40.80 Sec struct Sc=7.00 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTcAGAGCGTTCGGCTATTAACCGAACGGtGAGTAGTTCAAGACCACCCAGGGACG Str: >>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<......>>.>.......<.<<.<<<<<<<. chr1.trna37 (148281365-148281436) Length: 72 bp Type: His Anticodon: GTG at 34-36 (148281398-148281400) Score: 60.1 HMM Sc=29.80 Sec struct Sc=30.30 * | * | * | * | * | * | * | Seq: GCCGTGATCGTATAGTGGTtAGTACTCTGCGTTGTGGCCGCAGCAaCCTCGGTTCGAATCCGAGTCACGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna38 (148328812-148328883) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (148328845-148328847) Score: 58.5 HMM Sc=36.20 Sec struct Sc=22.30 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTaAGCACTCTGGACTCTGAATCCAGCCATCTGAGTTCGAGTCTCTGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>.>>>.......<<<.<<<<<<<<. chr1.trna39 (148353561-148353632) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (148353594-148353596) Score: 35.0 Filtered, Possible pseudogene: HMM Sc=34.30 Sec struct Sc=0.70 * | * | * | * | * | * | * | Seq: GGTTCCATGGGTTAATGGTgAGCACCCTGGACTCTGAATCAAGCGaTCCGAGTTCAAATCTCGGTGGTACCT Str: >>>.>>>..>..>........<..<.>>.>>.......<<.<<....>>>>>.......<<<<<<<<.<<<. chr1.trna40 (148405384-148405457) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (148405418-148405420) Score: 46.1 Filtered: HMM Sc=37.70 Sec struct Sc=8.40 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTTGACTGTTAACTGAAAGGtTGGTGGTGCAAGCCCATCCAGGGATG Str: >>>>>>>..>>>>.........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna41 (148529257-148529330) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (148529291-148529293) Score: 80.9 HMM Sc=55.20 Sec struct Sc=25.70 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAGGtTGGTGGTTCGAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna42 (149044937-149045008) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (149044970-149044972) Score: 44.7 Filtered: HMM Sc=36.50 Sec struct Sc=8.20 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTgAGCACTTTGGACTCTGAATACAGTGaTCAGAGTTCAAGTCTCACTGGGACCT Str: >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<......>>>.......<<<..<<<<<<<. chr1.trna43 (149639453-149639526) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (149639487-149639489) Score: 40.7 Filtered, Possible pseudogene: HMM Sc=36.20 Sec struct Sc=4.50 * | * | * | * | * | * | * | Seq: GTCTCTGTGGTGCAATCGGTtAGCGCGTTTGACTGTTAACTGAAAGGtTGGTGGTGCAAGCCCATCCAGGGATG Str: >>>>>>>..>>>>.........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna44 (153671250-153671321) Length: 72 bp Type: iMet Anticodon: CAT at 33-35 (153671282-153671284) Score: 60.4 HMM Sc=30.80 Sec struct Sc=29.60 * | * | * | * | * | * | * | Seq: AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGtCGATGGATCGAAACCATCCTCTGCTA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna45 (161420871-161420943) Length: 73 bp Type: Sup Anticodon: TTA at 35-37 (161420905-161420907) Score: 36.3 Filtered, Possible pseudogene: HMM Sc=34.60 Sec struct Sc=1.70 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGCtAGGATTCTaGTGCTTTAACTGCcAGCGCCCAGGTTCAATTCCCGGTTAGGAAA Str: >.>>>>>..>>>>........<<<<.>>.>>>.......<<<.<<...>>.>>.......<<.<<<<<<<.<. chr1.trna46 (161441533-161441615) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (161441567-161441569) Score: 78.2 HMM Sc=47.50 Sec struct Sc=30.70 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGCGGTctAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTCCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr1.trna47 (161443304-161443374) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (161443336-161443338) Score: 80.9 HMM Sc=60.10 Sec struct Sc=20.80 * | * | * | * | * | * | * | Seq: GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCCATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna48 (161448951-161449033) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (161448985-161448987) Score: 78.2 HMM Sc=47.50 Sec struct Sc=30.70 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGCGGTctAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTCCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr1.trna49 (161450677-161450747) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (161450709-161450711) Score: 80.9 HMM Sc=60.10 Sec struct Sc=20.80 * | * | * | * | * | * | * | Seq: GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCCATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna50 (161456332-161456414) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (161456366-161456368) Score: 78.2 HMM Sc=47.50 Sec struct Sc=30.70 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGCGGTctAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTCCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr1.trna51 (161458108-161458178) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (161458140-161458142) Score: 80.9 HMM Sc=60.10 Sec struct Sc=20.80 * | * | * | * | * | * | * | Seq: GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCCATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna52 (161463742-161463824) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (161463776-161463778) Score: 78.2 HMM Sc=47.50 Sec struct Sc=30.70 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGCGGTctAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTCCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr1.trna53 (161465468-161465538) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (161465500-161465502) Score: 80.9 HMM Sc=60.10 Sec struct Sc=20.80 * | * | * | * | * | * | * | Seq: GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCCATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna54 (161471123-161471205) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (161471157-161471159) Score: 78.2 HMM Sc=47.50 Sec struct Sc=30.70 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGCGGTctAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTCCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr1.trna55 (161480566-161480636) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (161480598-161480600) Score: 69.4 HMM Sc=50.30 Sec struct Sc=19.10 * | * | * | * | * | * | * | Seq: GCATAGGTGGTTCAGTGGTAGAATTCTTGCCTGCCACGCAGGAGGCCCAGGTTTGATTCCTGGCCCATGCA Str: >>>>.>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<.<<<<. chr1.trna56 (161523145-161523216) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (161523178-161523180) Score: 23.5 Filtered: HMM Sc=14.70 Sec struct Sc=8.80 * | * | * | * | * | * | * | Seq: TCCTTGTTACTATAGTGGTgAGTATCTCTGCCTGTCATGCGTGAGaGAGGGGGTCGATTCCCCGACGGGGAG Str: >>>>>>>...>>>........<<<..>.>>>.......<<<.<.....>>>>.......<<<<.<<<<<<<. chr1.trna57 (161531113-161531184) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (161531146-161531148) Score: 73.8 HMM Sc=49.30 Sec struct Sc=24.50 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTATAGTGGTgAGCATAGCTGCCTTCCAAGCAGTTGaCCCGGGTTCGATTCCCGGCCAACGCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna58 (161540241-161540314) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (161540275-161540277) Score: 81.5 HMM Sc=55.70 Sec struct Sc=25.80 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAGGtTGGTGGTTCGATCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna59 (161604798-161604869) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (161604831-161604833) Score: 24.8 Filtered: HMM Sc=14.40 Sec struct Sc=10.40 * | * | * | * | * | * | * | Seq: TCCTTGTTACTATAGTGGTaAGTATCTCTGCCTGTCATGCATGAGaGAGGGGGTCGATTCCCTGACGGGGAG Str: >>>>>>>...>>>........<<<..>.>>>.......<<<.<.....>>>>.......<<<<.<<<<<<<. chr1.trna60 (161612718-161612789) Length: 72 bp Type: Glu Anticodon: TTC at 34-36 (161612751-161612753) Score: 54.6 Filtered: HMM Sc=46.60 Sec struct Sc=8.00 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTGTAGTGGTgAGCACAGCTGCCTTTCAAGCAGTTAaCGCGGGTTCGATTCCCGGGTAACGAA Str: .>>>>>...>>>>........<<<<.>>>>>.......<<<<<.....>>>>.......<<<<..<<<<<.. chr1.trna61 (161621675-161621748) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (161621709-161621711) Score: 39.0 Filtered: HMM Sc=33.70 Sec struct Sc=5.30 * | * | * | * | * | * | * | Seq: GTTTCTGTAGCGCGATCGGTtAGCGCCTTCGGCTGTTAAACGAAAGGtTGGTGGTTCGTTCCCACCCCGGGACA Str: >>>>>.>..>>>>.........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<.<<<<<. chr1.trna62 (165596913-165596985) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (165596946-165596948) Score: 46.9 Filtered, Possible pseudogene: HMM Sc=48.20 Sec struct Sc=-1.30 * | * | * | * | * | * | * | Seq: GTCTAGCTAGATCAGTTGGTAGAGCATAAGACTCTTAATCTCAGGGtCATGGGTTTGAGCCCTACGTTGGGCG Str: >>>>>>>..>.>>........<<.<.>.>>>.......<<<.<......>>>>.......<<<<.<<<<<<<. chr1.trna63 (167714725-167714796) Length: 72 bp Type: Pro Anticodon: CGG at 33-35 (167714757-167714759) Score: 70.2 HMM Sc=43.80 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTCGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna64 (204506527-204506599) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (204506560-204506562) Score: 87.8 HMM Sc=67.30 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGtCCAGGGTTCAAGTCCCTGTTCGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna65 (205474143-205474215) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (205474176-205474178) Score: 65.1 Filtered: HMM Sc=55.20 Sec struct Sc=9.90 * | * | * | * | * | * | * | Seq: GCCCGGAGAGCTCAGTGGGtAGAGCATCAGACTTTTAATCTGAGGGtCCAGGGTTCAAGTCCTCGTTCGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<. chr1.trna66 (222465005-222465077) Length: 73 bp Type: Thr Anticodon: TGT at 34-36 (222465038-222465040) Score: 84.1 HMM Sc=60.00 Sec struct Sc=24.10 * | * | * | * | * | * | * | Seq: GGCTCCATAGCTCAGTGGTtAGAGCACTGGTCTTGTAAACCAGGGGtCGCGAGTTCGATCCTCGCTGGGGCCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna69 (248873855-248873960) Length: 106 bp Type: Leu Anticodon: CAA at 35-37 (248873889-248873891) Score: 73.6 Possible intron: 39-60 (248873893-248873914) HMM Sc=52.30 Sec struct Sc=21.30 * | * | * | * | * | * | * | * | * | * | * Seq: GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGgtaagcaccttgcctgcgggctTTCTGGTCTCCGGATGGAGGCGTGGGTTCGAATCCCACTTCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>.............................<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. chr1.trna70 (248874248-248874319) Length: 72 bp Type: Glu Anticodon: CTC at 34-36 (248874281-248874283) Score: 68.7 HMM Sc=47.40 Sec struct Sc=21.30 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGTtAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGAAA Str: >.>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<.<. chr1.trna71 (207004885-207004809) Length: 77 bp Type: Pro Anticodon: TGG at 34-36 (207004852-207004850) Score: 22.6 Filtered, Possible pseudogene: HMM Sc=35.20 Sec struct Sc=-12.60 * | * | * | * | * | * | * | * Seq: GCCAGGAGAGCTCAGTGGTgATGGGATGAGATCTGGACTCACACCTCTAGgCCTGGGTTCAAATCCCAGGTCTAGCG Str: >>.>>>....>>..........<<..>>.>>.......<<.<<.........>>>>>.......<<<<<.<<<.<<. chr1.trna72 (204507102-204507030) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (204507069-204507067) Score: 87.8 HMM Sc=67.30 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGtCCAGGGTTCAAGTCCCTGTTCGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna73 (180215213-180215141) Length: 73 bp Type: Val Anticodon: AAC at 34-36 (180215180-180215178) Score: 39.9 Filtered: HMM Sc=26.30 Sec struct Sc=13.60 * | * | * | * | * | * | * | Seq: GTTTCCATAGTGTACTGGTtATCACATTCACCTAACACGCGAAAGGtCCTTGGTTTGAAACCAGGCAGAAACA Str: >>>>>....>>>..........<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<..<<<<<. chr1.trna74 (172188473-172188398) Length: 76 bp Type: Undet Anticodon: NNN at 0-0 (0-0) Score: 24.5 Filtered, Possible pseudogene: HMM Sc=24.10 Sec struct Sc=0.40 * | * | * | * | * | * | * | * Seq: TCTCcaccCTGTGGTCTAGTGGTtAGGAGTTGGTGCTTTCGTCATGACAGCCCAGGTTCAATTCCTGGTTAGAGAG Str: >>>>......>...>>>........<<<..>>..........<<.......>>>>>.......<<<<<<..<<<<. chr1.trna75 (167715559-167715488) Length: 72 bp Type: Pro Anticodon: AGG at 33-35 (167715527-167715525) Score: 70.2 HMM Sc=43.80 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna76 (161612029-161611946) Length: 84 bp Type: Leu Anticodon: CAA at 36-38 (161611994-161611992) Score: 57.5 HMM Sc=39.40 Sec struct Sc=18.10 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGCAGTcttAAGGCGCTGCGTTCAAATCGCACCCTCCGCTGGAGGCGTGGGTTCGAATCCCACTTTTGACA Str: >>>>>>>..>>>............<<<..>>>>.......<<<<..>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr1.trna77 (161605566-161605496) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (161605534-161605532) Score: 26.1 Filtered, Possible pseudogene: HMM Sc=24.70 Sec struct Sc=1.40 * | * | * | * | * | * | * | Seq: GCATTGGTGGTGTAGTGGTAGACTTCTCGCCCGCAACGCGGGAGGCCCGCGTCCGATTACCGGCCAATGCA Str: >>>>>>>..>..>.......<..<.>>>>>.......<<<<<....>>>...........<<<<<<<<<<. chr1.trna78 (161530424-161530342) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (161530390-161530388) Score: 78.2 HMM Sc=47.50 Sec struct Sc=30.70 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGCGGTctAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTCCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr1.trna79 (161523917-161523847) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (161523885-161523883) Score: 81.0 HMM Sc=59.90 Sec struct Sc=21.10 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna80 (161470486-161470415) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (161470453-161470451) Score: 66.5 HMM Sc=35.70 Sec struct Sc=30.80 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna81 (161469828-161469757) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (161469795-161469793) Score: 73.8 HMM Sc=49.30 Sec struct Sc=24.50 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTATAGTGGTgAGCATAGCTGCCTTCCAAGCAGTTGaCCCGGGTTCGATTCCCGGCCAACGCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna82 (161469470-161469399) Length: 72 bp Type: Glu Anticodon: CTC at 34-36 (161469437-161469435) Score: 73.2 HMM Sc=49.00 Sec struct Sc=24.20 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGTtAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna83 (161463105-161463034) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (161463072-161463070) Score: 66.5 HMM Sc=35.70 Sec struct Sc=30.80 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna84 (161462447-161462376) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (161462414-161462412) Score: 73.8 HMM Sc=49.30 Sec struct Sc=24.50 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTATAGTGGTgAGCATAGCTGCCTTCCAAGCAGTTGaCCCGGGTTCGATTCCCGGCCAACGCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna85 (161462090-161462019) Length: 72 bp Type: Glu Anticodon: CTC at 34-36 (161462057-161462055) Score: 73.2 HMM Sc=49.00 Sec struct Sc=24.20 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGTtAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna86 (161455695-161455624) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (161455662-161455660) Score: 66.5 HMM Sc=35.70 Sec struct Sc=30.80 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna87 (161455037-161454966) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (161455004-161455002) Score: 73.8 HMM Sc=49.30 Sec struct Sc=24.50 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTATAGTGGTgAGCATAGCTGCCTTCCAAGCAGTTGaCCCGGGTTCGATTCCCGGCCAACGCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna88 (161454679-161454608) Length: 72 bp Type: Glu Anticodon: CTC at 34-36 (161454646-161454644) Score: 73.2 HMM Sc=49.00 Sec struct Sc=24.20 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGTtAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna89 (161448314-161448243) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (161448281-161448279) Score: 66.5 HMM Sc=35.70 Sec struct Sc=30.80 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna90 (161447656-161447585) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (161447623-161447621) Score: 73.8 HMM Sc=49.30 Sec struct Sc=24.50 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTATAGTGGTgAGCATAGCTGCCTTCCAAGCAGTTGaCCCGGGTTCGATTCCCGGCCAACGCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna91 (161447299-161447228) Length: 72 bp Type: Glu Anticodon: CTC at 34-36 (161447266-161447264) Score: 73.2 HMM Sc=49.00 Sec struct Sc=24.20 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGTtAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna92 (161440896-161440825) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (161440863-161440861) Score: 66.5 HMM Sc=35.70 Sec struct Sc=30.80 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna93 (161440242-161440171) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (161440209-161440207) Score: 56.0 HMM Sc=41.50 Sec struct Sc=14.50 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTATAGTGGTgAGCATAGTTGCCTTCCAAGCAGTTGaCCCGGGCTCGATTCCCGCCCAACGCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<.....>>>>.......<<<<.<<<<<<<. chr1.trna94 (161428150-161428077) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (161428116-161428114) Score: 80.9 HMM Sc=55.20 Sec struct Sc=25.70 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAGGtTGGTGGTTCGAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna95 (161422164-161422093) Length: 72 bp Type: Glu Anticodon: TTC at 34-36 (161422131-161422129) Score: 68.7 HMM Sc=44.50 Sec struct Sc=24.20 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGCtAGGATTCGGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna96 (161399772-161399700) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (161399739-161399737) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTCACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna97 (159141684-159141611) Length: 74 bp Type: Arg Anticodon: TCT at 35-37 (159141650-159141648) Score: 78.5 HMM Sc=56.90 Sec struct Sc=21.60 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATGGAcgAGCGCGCTGGACTTCTAATCCAGAGGtTCCGGGTTCGAGTCCCGGCAGAGATG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna98 (150045476-150045406) Length: 71 bp Type: Ala Anticodon: AGC at 33-35 (150045444-150045442) Score: 47.4 Filtered: HMM Sc=39.40 Sec struct Sc=8.00 * | * | * | * | * | * | * | Seq: GGGGGTGTAGATCAGTGGTAGGGCGCACGCTTAGCATGCATGAGGcCCTGGGTCAATCcCCAGCACCTCCA Str: >>>>>>>..>.>>.......<<.<.>>.>>.......<<.<<.....>>>>........<<<<<<<<<<<. chr1.trna99 (149740321-149740248) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (149740287-149740285) Score: 69.8 HMM Sc=48.30 Sec struct Sc=21.50 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGCtAGCGCGTTTGGCTGTTAACTAAAAGGtTGGTGGTTCGAACCCACCCAGAGGCG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna100 (149712624-149712552) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (149712591-149712589) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTCACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna101 (149708730-149708660) Length: 71 bp Type: Val Anticodon: CAC at 33-35 (149708698-149708696) Score: 53.6 Filtered, Possible pseudogene: HMM Sc=58.40 Sec struct Sc=-4.80 * | * | * | * | * | * | * | Seq: GCagTGGTGGTTCAGTGGTAGGGTTCTCGCCTCACACGCGGGAGaCCCGGGTTCAATTCCCGGTCAAAGCA Str: >>..>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<..<<. chr1.trna102 (149701412-149701333) Length: 80 bp Type: Phe Anticodon: GAA at 42-44 (149701371-149701369) Score: 32.2 Filtered, Possible pseudogene: HMM Sc=29.00 Sec struct Sc=3.20 * | * | * | * | * | * | * | * Seq: TCCgCatctgcaTGGTTGTCTAGTGGCtAGGATTCGGTGCTGAAAGCGCCACGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>.>.......>>>..>>>>........<<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna103 (149698551-149698478) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (149698517-149698515) Score: 42.4 Filtered: HMM Sc=35.20 Sec struct Sc=7.20 * | * | * | * | * | * | * | Seq: ATCTCCGTGGAGCAATTGGTtAGCGCGTTCGGCTGTTAACCGGAAAGtTGGTGGTTCGAGCCTACCCAGGGACG Str: .>>>>.>..>.>>.........<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<.. chr1.trna104 (149692877-149692805) Length: 73 bp Type: Glu Anticodon: TTC at 34-36 (149692844-149692842) Score: 28.8 Filtered, Possible pseudogene: HMM Sc=28.50 Sec struct Sc=0.30 * | * | * | * | * | * | * | Seq: TCCCCGGTGGTCTAGTGGCtAGGATTCGGCGCTTTCACCGCCTGCAGCTCGAGTTCGATTCCTGGTCAGGGAA Str: >>>>.>>..>>>>........<<<<..>>>>.......<<<<......>>>.>.......<.<<<<<.<<<<. chr1.trna105 (149646524-149646451) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (149646490-149646488) Score: 53.5 HMM Sc=38.90 Sec struct Sc=14.60 * | * | * | * | * | * | * | Seq: GTCTCTGTGGTGCAATCGGTtAGCGCGTTCCGCTGTTAACCGAAAGCtTGGTGGTTCGAGCCCACCCAGGGATG Str: >>>>>>>..>>>>.........<<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna106 (149558493-149558419) Length: 75 bp Type: Asn Anticodon: GTT at 35-37 (149558459-149558457) Score: 64.1 HMM Sc=46.90 Sec struct Sc=17.20 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATTGGTtAGCGCGTTCGGTTGTTAACCGtAAAGGtTGGTGGTTCGAGCCCACCCAGGAACG Str: >>.>>>>..>>>>.........<<<<.>>>>>.......<<<.<<.....>>>>>.......<<<<<<<<<.<<. chr1.trna107 (148378989-148378916) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (148378955-148378953) Score: 42.4 Filtered, Possible pseudogene: HMM Sc=41.20 Sec struct Sc=1.20 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCACAATCGGTtAGCGCGTTCGGCTGTTAATCTAGAGGtTGGTGGTTAGAGCCCACTGAGGGATG Str: >>>>>>...>>.>.........<.<<.>>.>>.......<<.<<.....>>>>>.......<<<<<.<<<<<<. chr1.trna108 (148317438-148317369) Length: 70 bp Type: Asn Anticodon: GTT at 31-33 (148317408-148317406) Score: 20.4 Filtered: HMM Sc=10.70 Sec struct Sc=9.70 * | * | * | * | * | * | * Seq: GTCTCTGTTGCGCAATCAGCGCGTTTGGCTGTTAACAGAAAGGcTGGTGGTCCGAGCCCAACCAGGGACT Str: >>>>>>>..>>>>.....<<<<.>>>.>.......<.<<<.....>.>>>.......<<<.<<<<<<<<. chr1.trna109 (148308993-148308922) Length: 72 bp Type: Glu Anticodon: TTC at 34-36 (148308960-148308958) Score: 38.6 Filtered, Possible pseudogene: HMM Sc=37.90 Sec struct Sc=0.70 * | * | * | * | * | * | * | Seq: TCCTTGGTGGTCTAGTGGCtAGGATTCGGTGCTTTCACCCGTGCGGCCCGGGTTCAATTCCCGATGAAGGAA Str: >>>>>.>..>>>>........<<<<.>>..>.......<..<<.....>>>>.......<<<<.<.<<<<<. chr1.trna110 (148302805-148302734) Length: 72 bp Type: His Anticodon: GTG at 34-36 (148302772-148302770) Score: 60.1 HMM Sc=29.80 Sec struct Sc=30.30 * | * | * | * | * | * | * | Seq: GCCGTGATCGTATAGTGGTtAGTACTCTGCGTTGTGGCCGCAGCAaCCTCGGTTCGAATCCGAGTCACGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna111 (148265179-148265108) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (148265146-148265144) Score: 71.9 HMM Sc=44.40 Sec struct Sc=27.50 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTaAGCACTCTGGACTCTGAATCCAGCGaTCCGAGTTCGAGTCTCGGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna112 (148244538-148244467) Length: 72 bp Type: Gly Anticodon: CCC at 34-36 (148244505-148244503) Score: 28.2 Filtered, Possible pseudogene: HMM Sc=27.10 Sec struct Sc=1.10 * | * | * | * | * | * | * | Seq: GCGTCAGTGGtTTTAGTGGTGGAATTCCTGCCTCCCATGCACGAGaTCCGTGTTCAACTCCTGGTTGGTGCA Str: >>>>>>>..>.>>>.......<<<<.>.>>>.......<<<.<....>>>.>.......<.<<<<<<<<<<. chr1.trna113 (148048589-148048516) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (148048555-148048553) Score: 68.6 HMM Sc=49.80 Sec struct Sc=18.80 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACTGAAAGGtTAGTGGTTCGAGCCCACCCGGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<<<<. chr1.trna114 (147005272-147005201) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (147005239-147005237) Score: 37.3 Filtered: HMM Sc=28.50 Sec struct Sc=8.80 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTgACCACTTTGGACTCTGAATACAGTGaTCAGAGTTCAAGTCTCACTGGAACCT Str: >>>>>>>..>>>..........<<<.>>>.>.......<.<<<......>>>.......<<<..<<<<<<<. chr1.trna115 (146486645-146486572) Length: 74 bp Type: Asn Anticodon: ATT at 35-37 (146486611-146486609) Score: 47.8 Filtered: HMM Sc=40.80 Sec struct Sc=7.00 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTcAGAGCGTTCGGCTATTAACCGAACGGtGAGTAGTTCAAGACCACCCAGGGACG Str: >>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<......>>.>.......<.<<.<<<<<<<. chr1.trna116 (146049273-146049198) Length: 76 bp Type: Asn Anticodon: GTT at 35-37 (146049239-146049237) Score: 41.0 Filtered: HMM Sc=17.40 Sec struct Sc=23.60 * | * | * | * | * | * | * | * Seq: GTCTCTGTGGCGCCATCGGTtAGTGCCTTCGGCTGTTTgaACCGAAAGGcTGGTGGTTCAAGCCCACCCAGAGATG Str: >>>>>>>..>>>>.........<<<<.>>>>>.........<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna117 (145475454-145475381) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (145475420-145475418) Score: 74.9 HMM Sc=52.00 Sec struct Sc=22.90 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACTGAAAGGtTGGTGGTTCGAGCCCACCCGGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna118 (144567588-144567515) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (144567554-144567552) Score: 80.9 HMM Sc=55.20 Sec struct Sc=25.70 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAGGtTGGTGGTTCGAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna119 (144539723-144539650) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (144539689-144539687) Score: 47.0 Filtered: HMM Sc=39.60 Sec struct Sc=7.40 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCACAATCGGTtAGCGCGTTTGGCTGTTAATCTAAAGTtTGGTGGTTAGAGCCCACTGAGGGACG Str: >>>>>>...>>.>.........<.<<.>>.>>.......<<.<<.....>>>>>.......<<<<<.<<<<<<. chr1.trna120 (143848584-143848514) Length: 71 bp Type: Ala Anticodon: TGC at 35-37 (143848550-143848548) Score: 22.4 Filtered, Possible pseudogene: HMM Sc=24.90 Sec struct Sc=-2.50 * | * | * | * | * | * | * | Seq: GGATTGGTGGTCCAGTGGTAGAATTCTcaCCGCCTGCATAGGAGaCCCTGGTTTAATTCCTGGCCAATGCA Str: >.>>>>>..>>.>.......<.<<.....>>.........<<....>>.>>.......<<.<<<<<<<.<. chr1.trna121 (143831781-143831708) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (143831747-143831745) Score: 54.5 HMM Sc=35.10 Sec struct Sc=19.40 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGCtAGCGCGTTTGGCTGTTAACTAAAAAGtTGGTGGTTCGAACACACCCAGAGGCG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>.........<<<<<<<<<<<. chr1.trna122 (143804066-143803994) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (143804033-143804031) Score: 72.2 HMM Sc=46.10 Sec struct Sc=26.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTCACACGCGAAAGGtCCCCGGTTCGAAACTGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna123 (143800111-143800041) Length: 71 bp Type: Val Anticodon: CAC at 33-35 (143800079-143800077) Score: 58.1 Filtered: HMM Sc=60.20 Sec struct Sc=-2.10 * | * | * | * | * | * | * | Seq: GCACTGGTGGTTCAGTGGTAGGGTTCTCGCCTCACACGCGGGAGaCCCGGGTTCAATTCCCGGTCAAGGCA Str: >>..>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<..<<. chr1.trna124 (143792803-143792724) Length: 80 bp Type: Phe Anticodon: GAA at 42-44 (143792762-143792760) Score: 32.2 Filtered, Possible pseudogene: HMM Sc=29.00 Sec struct Sc=3.20 * | * | * | * | * | * | * | * Seq: TCCgCatctgcaTGGTTGTCTAGTGGCtAGGATTCGGTGCTGAAAGCGCCACGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>.>.......>>>..>>>>........<<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna125 (143789941-143789868) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (143789907-143789905) Score: 42.4 Filtered: HMM Sc=35.20 Sec struct Sc=7.20 * | * | * | * | * | * | * | Seq: ATCTCCGTGGAGCAATTGGTtAGCGCGTTCGGCTGTTAACCGGAAAGtTGGTGGTTCGAGCCTACCCAGGGACG Str: .>>>>.>..>.>>.........<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<.. chr1.trna126 (143784217-143784145) Length: 73 bp Type: Glu Anticodon: TTC at 34-36 (143784184-143784182) Score: 28.2 Filtered, Possible pseudogene: HMM Sc=28.30 Sec struct Sc=-0.10 * | * | * | * | * | * | * | Seq: TCCGTGGTGGTCTAGTGGCtAGGATTCGGCGCTTTCACCGCCTGCAGCTCGAGTTCGATTCCTGGTCAGGGAA Str: >>>.>>>..>>>>........<<<<..>>>>.......<<<<......>>>.>.......<.<<<<<<.<<<. chr1.trna127 (143735993-143735920) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (143735959-143735957) Score: 73.8 HMM Sc=51.20 Sec struct Sc=22.60 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATGGGTtAGCGCGTTCGGCTGTTAACCGAAAGGtTGGTGGTTCGAGCCCATCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna128 (143717365-143717292) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (143717331-143717329) Score: 37.2 Filtered, Possible pseudogene: HMM Sc=37.80 Sec struct Sc=-0.60 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCACAATCGGTtAGAGCGTTCGGCTGTTAATCTAAAGGtTGGTGGCTAGAACCCACTGAGGGACG Str: >>>>>>...>>.>.........<.<<.>>.>>.......<<.<<.....>>>>>.......<<<<<.<<<<<<. chr1.trna129 (143667059-143666988) Length: 72 bp Type: Glu Anticodon: TTC at 34-36 (143667026-143667024) Score: 31.5 Filtered, Possible pseudogene: HMM Sc=33.40 Sec struct Sc=-1.90 * | * | * | * | * | * | * | Seq: TGTCTGGTGGTCAAGTGGCtAGGATTTGGCGCTTTCACTGCCGCGGCCCGCGTTCGATTCCCGGTCAGGGAA Str: >.>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>.>.......<.<<<<<<<<.<. chr1.trna130 (143661253-143661182) Length: 72 bp Type: His Anticodon: GTG at 34-36 (143661220-143661218) Score: 49.1 Filtered: HMM Sc=21.70 Sec struct Sc=27.40 * | * | * | * | * | * | * | Seq: GCCATGATCGTATAGTGGTtAGTACTCTGCGCTGTGGCCGCAGCAaCCTCGATTCGAATCCGAGTCACGGCA Str: >>>.>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>.........<<<<<<<.<<<. chr1.trna131 (121048505-121048432) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (121048471-121048469) Score: 62.4 HMM Sc=40.90 Sec struct Sc=21.50 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGCtAGCGCTTTTGGCTGTTAACTAAAAGGtTGGTGGTTTGAACCCACCCAGAGGCG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna132 (121020801-121020729) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (121020768-121020766) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTCACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna133 (121016915-121016845) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (121016883-121016881) Score: 57.2 Filtered: HMM Sc=53.80 Sec struct Sc=3.40 * | * | * | * | * | * | * | Seq: GCACTGGTGGTTCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGaCCCGGGTTCAATTCCCGGTCAAGATA Str: >...>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<...<. chr1.trna134 (121009623-121009544) Length: 80 bp Type: Phe Anticodon: GAA at 42-44 (121009582-121009580) Score: 26.6 Filtered, Possible pseudogene: HMM Sc=28.70 Sec struct Sc=-2.10 * | * | * | * | * | * | * | * Seq: TCCgCatctgcaTGGTTGTCTAGTGGCtAGGATTCGGTGCTGAAAGCGTCACGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>.>.......>>>..>>>>........<<<<..>>>>.......<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna135 (121006768-121006695) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (121006734-121006732) Score: 37.7 Filtered: HMM Sc=30.60 Sec struct Sc=7.10 * | * | * | * | * | * | * | Seq: ATCTCCGTGGAGCAATTGGTtAGCGCGTTCGGCCGTTAACCGGAAAGtTGGTGGTTCGAGCCTACCCAGGGACG Str: .>>>>.>..>.>>.........<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<.. chr1.trna136 (121001060-121000988) Length: 73 bp Type: Glu Anticodon: TTC at 34-36 (121001027-121001025) Score: 35.9 Filtered: HMM Sc=28.40 Sec struct Sc=7.50 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGCtAGGATTCGGCGCTTTCACCGCCTGCAGCTCGAGTTCGATTCCTGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<..>>>>.......<<<<......>>>.>.......<.<<<<<<<<<<. chr1.trna137 (120952364-120952291) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (120952330-120952328) Score: 53.5 HMM Sc=38.90 Sec struct Sc=14.60 * | * | * | * | * | * | * | Seq: GTCTCTGTGGTGCAATCGGTtAGCGCGTTCCGCTGTTAACCGAAAGCtTGGTGGTTCGAGCCCACCCAGGGATG Str: >>>>>>>..>>>>.........<<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna138 (120844335-120844262) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (120844301-120844299) Score: 73.5 HMM Sc=54.70 Sec struct Sc=18.80 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGTAGTCGGTtAGCGCGTTCGGCTGTTAACCGAAAGGtTGGTGGTTCGAGCCCACCCAGGAACG Str: >>.>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.<<. chr1.trna139 (120476923-120476852) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (120476890-120476888) Score: 44.7 Filtered: HMM Sc=36.50 Sec struct Sc=8.20 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTgAGCACTTTGGACTCTGAATACAGTGaTCAGAGTTCAAGTCTCACTGGGACCT Str: >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<......>>>.......<<<..<<<<<<<. chr1.trna140 (93516349-93516277) Length: 73 bp Type: Cys Anticodon: GCA at 34-36 (93516316-93516314) Score: 77.8 HMM Sc=57.60 Sec struct Sc=20.20 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCAAATCCGGGTGCCCCCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna141 (54957941-54957869) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (54957908-54957906) Score: 64.8 HMM Sc=54.80 Sec struct Sc=10.00 * | * | * | * | * | * | * | Seq: GCCCAGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGtCATGGGTTTGAGCCCCACGTTTGGTG Str: >>>.>>>..>>>>........<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<.<<<. chr1.trna142 (16680078-16680006) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (16680045-16680043) Score: 37.6 Filtered: HMM Sc=23.00 Sec struct Sc=14.60 * | * | * | * | * | * | * | Seq: GTTTCTGTGGTGTAGTGGTtATCATGTTCGCCTCACACGAGAAAAGtCCCTGATTCGAGACTGGGTGGGAACG Str: >>>>>>>..>>>..........<<<.>>>.>.......<.<<<.....>>>>.........<<<<<<<<<<<. chr1.trna143 (16678341-16678271) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (16678309-16678307) Score: 65.7 Filtered: HMM Sc=56.10 Sec struct Sc=9.60 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTTTAGTGGTAGAATTCTCGCCTCCCATGCGGGAGaCCCGGGTTCAATTCCCGGCCACTGCA Str: >>>.>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<.<<<. chr1.trna144 (16547737-16547665) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (16547704-16547702) Score: 27.2 Filtered, Possible pseudogene: HMM Sc=26.90 Sec struct Sc=0.30 * | * | * | * | * | * | * | Seq: GTTTCTGTGGTGTAGTGGTtATTATGTTCGCTTCACATATGAAAGGtCTCTGGTTCGAGACTGCGTGGGAACA Str: >>>>>>>..>>>..........<<<.>>>>.........<<<<.....>.>>>.......<<<.<<<<<<<<. chr1.trna145 (16546009-16545939) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (16545977-16545975) Score: 78.3 HMM Sc=56.60 Sec struct Sc=21.70 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGaCCCGGGTTCAATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna146 (16535350-16535279) Length: 72 bp Type: Glu Anticodon: TTC at 34-36 (16535317-16535315) Score: 68.7 HMM Sc=44.50 Sec struct Sc=24.20 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGCtAGGATTCGGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1.trna147 (16532471-16532398) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (16532437-16532435) Score: 44.1 Filtered: HMM Sc=35.00 Sec struct Sc=9.10 * | * | * | * | * | * | * | Seq: GTCTCTGTGGTGCAATCGGTtAGCGCGTTCGGCTGTTAACCATAAGGtTGGTGGTTACAGACCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>..>>.......<<..<.....>>>>>.......<<<<<<<<<<<<. chr1.trna148 (16520658-16520585) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (16520624-16520622) Score: 76.5 HMM Sc=51.10 Sec struct Sc=25.40 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACTGAAAGGtTGGTGGTTCGAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1.trna149 (7930348-7930279) Length: 70 bp Type: Undet Anticodon: NNN at 0-0 (0-0) Score: 43.0 Filtered, Possible pseudogene: HMM Sc=38.40 Sec struct Sc=4.60 * | * | * | * | * | * | * Seq: TCCCTGGTAGTCTAGTGGTtAGGATTCCGCGCTCGCCATCACGaCCCGGGTTCGATTCCTGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.........>..><..<...>>>>>.......<<<<<<<<<<<<. chr10.trna1 (22563650-22563722) Length: 73 bp Type: Undet Anticodon: NNN at 0-0 (0-0) Score: 25.9 Filtered: HMM Sc=20.90 Sec struct Sc=5.00 * | * | * | * | * | * | * | Seq: GGCAGTGTGGCATAGTGGTtagaAATGTGCGCTCTGGGGCTGCTGAtCCCAGGCTCAAACCCTGGCGCTGTCA Str: >>>>>>>..>>>>...........<<<<...>.........<......>>>>>.......<<<<<<<<<<<<. chr10.trna2 (67764503-67764584) Length: 82 bp Type: Ser Anticodon: TGA at 34-36 (67764536-67764538) Score: 94.0 HMM Sc=64.50 Sec struct Sc=29.50 * | * | * | * | * | * | * | * | Seq: GCAGCGATGGCCGAGTGGTtAAGGCGTTGGACTTGAAATCCAATGGGGTCTCCCCGCGCAGGTTCGAACCCTGCTCGCTGCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr10.trna3 (62343914-62343841) Length: 74 bp Type: Undet Anticodon: NNN at 0-0 (0-0) Score: 20.5 Filtered, Possible pseudogene: HMM Sc=18.90 Sec struct Sc=1.60 * | * | * | * | * | * | * | Seq: CCCaaTGcTGTAGCTCAGCAGTtAAGGTTTGCCATTTTaCAATGGCAGCCTGGGTTCAATTCCCAGCTTAGGGA Str: >>>..>>..>..>>>..........<<<.>>>>>........<<<<<..>>>>>.......<<<<<<.<<<<<. chr10.trna4 (22229582-22229509) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (22229548-22229546) Score: 80.9 HMM Sc=55.20 Sec struct Sc=25.70 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAGGtTGGTGGTTCGAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr10.trna6 (5853783-5853711) Length: 73 bp Type: Val Anticodon: TAC at 34-36 (5853750-5853748) Score: 80.7 HMM Sc=52.50 Sec struct Sc=28.20 * | * | * | * | * | * | * | Seq: GGTTCCATAGTGTAGTGGTtATCACATCTGCTTTACACGCAGAAGGtCCTGGGTTCAAGCCCCAGTGGAACCA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr11.trna1 (9275243-9275316) Length: 74 bp Type: Leu Anticodon: CAA at 34-36 (9275276-9275278) Score: 66.5 HMM Sc=48.70 Sec struct Sc=17.80 * | * | * | * | * | * | * | Seq: GCCTCCTTAGTGCAGTAGGTAGCGCATCAGTCTCAAAATCTGAAtGGtCCTGAGTTCAAGCCTCAGAGGGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<......>>>>>.......<<<<<<<<<<<<. chr11.trna2 (59551294-59551379) Length: 86 bp Type: Arg Anticodon: TCT at 34-36 (59551327-59551329) Score: 70.3 Possible intron: 38-50 (59551331-59551343) HMM Sc=50.00 Sec struct Sc=20.30 * | * | * | * | * | * | * | * | * Seq: GGCTCTGTGGCGCAATGGAtAGCGCATTGGACTTCTAgatagttagagaaATTCAAAGGtTGTGGGTTCGAGTCCCACCAGAGTCG Str: >>>>>>>..>>>>........<<<<.>>>>>....................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr11.trna3 (59551755-59551837) Length: 83 bp Type: Leu Anticodon: TAA at 34-36 (59551788-59551790) Score: 85.0 HMM Sc=53.40 Sec struct Sc=31.60 * | * | * | * | * | * | * | * | Seq: ACCAGAATGGCCGAGTGGTtAAGGCGTTGGACTTAAGATCCAATGGATTCATATCCGCGTGGGTTCGAACCCCACTTCTGGTA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. chr11.trna4 (59556429-59556501) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (59556462-59556464) Score: 84.9 HMM Sc=68.10 Sec struct Sc=16.80 * | * | * | * | * | * | * | Seq: GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGtCCGGGGTTCAAGTCCCTGTTCGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr11.trna5 (66348120-66348201) Length: 82 bp Type: Ser Anticodon: GCT at 34-36 (66348153-66348155) Score: 89.1 HMM Sc=62.10 Sec struct Sc=27.00 * | * | * | * | * | * | * | * | Seq: GACGAGGTGGCCGAGTGGTtAAGGCGATGGACTGCTAATCCATTGTGCTTTGCACGCGTGGGTTCGAATCCCATCCTCGTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr11.trna6 (76235513-76235584) Length: 72 bp Type: Pro Anticodon: AGG at 33-35 (76235545-76235547) Score: 70.2 HMM Sc=43.80 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr11.trna8 (109165311-109165393) Length: 83 bp Type: Ser Anticodon: AGA at 35-37 (109165345-109165347) Score: 34.5 Filtered: HMM Sc=24.80 Sec struct Sc=9.70 * | * | * | * | * | * | * | * | Seq: GTgAGTTGTAGCTGAGTGGTtAAGGCAACGAGCTAGAAATTCGTTGGTTTCTCTCTgTGCAGGTTTGAATCCTGCTAATTATG Str: >>.>>>>>..>>>..........<<<.>>>>>.......<<<<<..>.......<...>>>>>.......<<<<<<<<<<<<. chr11.trna9 (118241372-118241450) Length: 79 bp Type: Arg Anticodon: CCT at 40-42 (118241411-118241413) Score: 21.2 Filtered, Possible pseudogene: HMM Sc=28.10 Sec struct Sc=-6.90 * | * | * | * | * | * | * | * Seq: GGCAGAATGGTGTTGTGATtgAGCACgcagGCCAcGGCTCCTAcACCaGAGGgTCTGGGTTCAAATCCCGGCCCTGTCA Str: >>>>>....>>>>.........<<<<.....>...>>........<<.<.....>>>>>.......<<<<<..<<<<<. chr11.trna10 (122559947-122560019) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (122559980-122559982) Score: 87.7 HMM Sc=66.60 Sec struct Sc=21.10 * | * | * | * | * | * | * | Seq: GCCTGGATAGCTCAGTTGGTAGAGCATCAGACTTTTAATCTGAGGGtCCAGGGTTCAAGTCCCTGTTCAGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr11.trna11 (113562356-113562273) Length: 84 bp Type: Leu Anticodon: TAA at 35-37 (113562322-113562320) Score: 45.5 Filtered: HMM Sc=33.10 Sec struct Sc=12.40 * | * | * | * | * | * | * | * | Seq: ACCAGGATGGCCAAGTAGTtaAAGGCACTGGACTTAAGAGCCAATGGACATATGTCTGTGTGGGTTTGAACCCCACTCCTGGTG Str: >>>>>>>..>>>...........<<<..>>>.........<<<..>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. chr11.trna12 (76235896-76235825) Length: 72 bp Type: Pro Anticodon: TGG at 33-35 (76235864-76235862) Score: 70.5 HMM Sc=44.30 Sec struct Sc=26.20 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGGTTTGGGTCCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr11.trna13 (59566452-59566380) Length: 73 bp Type: Phe Anticodon: GAA at 34-36 (59566419-59566417) Score: 87.9 HMM Sc=67.40 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGtCCCTGGTTCAATCCCGGGTTTCGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr11.trna14 (59560407-59560335) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (59560374-59560372) Score: 87.8 HMM Sc=67.30 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGtCCAGGGTTCAAGTCCCTGTTCGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr11.trna15 (59557569-59557497) Length: 73 bp Type: Phe Anticodon: GAA at 34-36 (59557536-59557534) Score: 88.9 HMM Sc=68.40 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGtCCCTGGTTCGATCCCGGGTTTCGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr11.trna16 (59551059-59550987) Length: 73 bp Type: Val Anticodon: TAC at 34-36 (59551026-59551024) Score: 80.5 HMM Sc=52.30 Sec struct Sc=28.20 * | * | * | * | * | * | * | Seq: GGTTCCATAGTGTAGCGGTtATCACGTCTGCTTTACACGCAGAAGGtCCTGGGTTCGAGCCCCAGTGGAACCA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr11.trna17 (59550701-59550629) Length: 73 bp Type: Val Anticodon: TAC at 34-36 (59550668-59550666) Score: 82.9 HMM Sc=54.70 Sec struct Sc=28.20 * | * | * | * | * | * | * | Seq: GGTTCCATAGTGTAGTGGTtATCACGTCTGCTTTACACGCAGAAGGtCCTGGGTTCGAGCCCCAGTGGAACCA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr11.trna18 (54759380-54759308) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (54759347-54759345) Score: 40.3 Filtered, Possible pseudogene: HMM Sc=37.60 Sec struct Sc=2.70 * | * | * | * | * | * | * | Seq: AACCGAATAGCTTAGTTGATGAAGCGTGAGACTCTTAATCTCAGGGtAGTGGGTTCAAGCCCCACATTGGACA Str: ..>>>>...>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<... chr11.trna19 (50274779-50274708) Length: 72 bp Type: Ala Anticodon: TGC at 33-35 (50274747-50274745) Score: 48.9 Filtered: HMM Sc=34.40 Sec struct Sc=14.50 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCGGATGCTTTGCATGTATGAGAcTTTGGGTTGGATCCCCAGCACCTCCA Str: >>>>>>>..>>>>.......<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<. chr11.trna20 (48065909-48065832) Length: 78 bp Type: Gln Anticodon: CTG at 34-36 (48065876-48065874) Score: 23.2 Filtered, Possible pseudogene: HMM Sc=27.70 Sec struct Sc=-4.50 * | * | * | * | * | * | * | * Seq: GCCAGCATGGTATAGTGGTTAAACACCAgGATTCTGAagTTCAGCTGCCTGGGTTCAAATCCCAGacctcactTGGCA Str: >>>>.....>>.>.......<.<<.....>>.........<<......>>>>>.......<<<<<........<<<<. chr12.trna1 (27690373-27690445) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (27690406-27690408) Score: 50.7 HMM Sc=40.10 Sec struct Sc=10.60 * | * | * | * | * | * | * | Seq: ACCCAGATAGCTCAGTCAGTAGAGCATCAGACTTTTAATCTGAGGGtCCAAGGTTCATGTCCCTTTTTGGGTG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<......>.>>.......<<.<.<<<<<<<. chr12.trna2 (56190364-56190445) Length: 82 bp Type: Ser Anticodon: CGA at 34-36 (56190397-56190399) Score: 89.6 HMM Sc=61.30 Sec struct Sc=28.30 * | * | * | * | * | * | * | * | Seq: GTCACGGTGGCCGAGTGGTtAAGGCGTTGGACTCGAAATCCAATGGGGTTTCCCCGCACAGGTTCGAATCCTGTTCGTGACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr12.trna3 (74457402-74457474) Length: 73 bp Type: Gln Anticodon: CTG at 34-36 (74457435-74457437) Score: 34.4 Filtered: HMM Sc=28.10 Sec struct Sc=6.30 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTaAGCACCCTGGACTCTGAATCCAGCAaCCAGAGTTCCAGTCTCAGCGtGGACCT Str: >>>>>>...>>>>........<<<<.>>>>>.......<<<<<....>.>>>.......<<<.<.<.<<<<<. chr12.trna4 (96036021-96036092) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (96036054-96036056) Score: 66.5 HMM Sc=35.70 Sec struct Sc=30.80 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr12.trna5 (98503503-98503574) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (98503536-98503538) Score: 65.4 HMM Sc=34.70 Sec struct Sc=30.70 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTtAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCAATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr12.trna6 (98504252-98504323) Length: 72 bp Type: Trp Anticodon: CCA at 33-35 (98504284-98504286) Score: 74.3 HMM Sc=51.60 Sec struct Sc=22.70 * | * | * | * | * | * | * | Seq: GACCTCGTGGCGCAACGGTAGCGCGTCTGACTCCAGATCAGAAGGcTGCGTGTTCGAATCACGTCGGGGTCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr12.trna7 (122376377-122376447) Length: 71 bp Type: Asp Anticodon: GTC at 34-36 (122376410-122376412) Score: 30.3 Filtered: HMM Sc=12.70 Sec struct Sc=17.60 * | * | * | * | * | * | * | Seq: TCCTTGTTAGTATAGTGGTgAGTGTTTCTGCCTGTCATGTGGAGACTGGAGTTTGAGTCCCCAACAGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...>>>.>.......<.<<<<<<<<<<. chr12.trna8 (124939966-124940037) Length: 72 bp Type: Ala Anticodon: TGC at 33-35 (124939998-124940000) Score: 78.8 HMM Sc=54.40 Sec struct Sc=24.40 * | * | * | * | * | * | * | Seq: GGGGATGTAGCTCAGTGGTAGAGCGCATGCTTTGCACGTATGAGGcCCCGGGTTCAATCCCCGGCATCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr12.trna9 (129231653-129231727) Length: 75 bp Type: Ile Anticodon: AAT at 36-38 (129231688-129231690) Score: 30.3 Filtered, Possible pseudogene: HMM Sc=33.10 Sec struct Sc=-2.80 * | * | * | * | * | * | * | Seq: TGGCTGATGaGCTCAGCTGGTgGGAGCATGGTGTTAATGAGGCTGAGGtCGTGGGTTCAATCCCCACCGGGCTAT Str: >>>>>.....>>>>.........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<..<<<<<. chr12.trna10 (124939718-124939647) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (124939685-124939683) Score: 66.5 HMM Sc=35.70 Sec struct Sc=30.80 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr12.trna11 (124927915-124927843) Length: 73 bp Type: Phe Anticodon: GAA at 34-36 (124927882-124927880) Score: 88.9 HMM Sc=68.40 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGtCCCTGGTTCGATCCCGGGTTTCGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr12.trna12 (124927416-124927345) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (124927383-124927381) Score: 66.5 HMM Sc=35.70 Sec struct Sc=30.80 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr12.trna13 (124921826-124921755) Length: 72 bp Type: Ala Anticodon: TGC at 33-35 (124921794-124921792) Score: 79.7 HMM Sc=55.30 Sec struct Sc=24.40 * | * | * | * | * | * | * | Seq: GGGGATGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGTATGAGGcCCCGGGTTCGATCCCCGGCATCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr12.trna14 (113948810-113948740) Length: 71 bp Type: Glu Anticodon: CTC at 33-35 (113948778-113948776) Score: 27.3 Filtered, Possible pseudogene: HMM Sc=32.40 Sec struct Sc=-5.10 * | * | * | * | * | * | * | Seq: GTGgATAGCCCAGCGGCtaTGGGAGCCGGGCTCTCACTCTGACGtCCTGGGTTCAAGTCCCAGTGTGCACA Str: >>>.>...>>>.........<<<...>>>>.......<<<<.....>>>>>.......<<<<<<...<<<. chr13.trna1 (114241414-114241339) Length: 76 bp Type: Ser Anticodon: GCT at 35-37 (114241380-114241378) Score: 24.5 Filtered, Possible pseudogene: HMM Sc=24.70 Sec struct Sc=-0.20 * | * | * | * | * | * | * | * Seq: AGCAGAGTGGtCACAGCAGTcAGCACAATGGCCTGCTGAGGCAGCACAGaCCTGAGTTCAAACCCCAGCTCTGCCA Str: .>>>>>>..>...>........<..<..>>.>.......<.<<........>>>.>.......<.<<<<<<<<<.. chr13.trna2 (94549722-94549650) Length: 73 bp Type: Phe Anticodon: GAA at 34-36 (94549689-94549687) Score: 88.9 HMM Sc=68.40 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGtCCCTGGTTCGATCCCGGGTTTCGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr13.trna3 (44917998-44917927) Length: 72 bp Type: Glu Anticodon: TTC at 34-36 (44917965-44917963) Score: 71.2 HMM Sc=46.50 Sec struct Sc=24.70 * | * | * | * | * | * | * | Seq: TCCCACATGGTCTAGCGGTtAGGATTCCTGGTTTTCACCCAGGCGGCCCGGGTTCGACTCCCGGTGTGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr13.trna4 (41455997-41455925) Length: 73 bp Type: Glu Anticodon: CTC at 35-37 (41455963-41455961) Score: 33.8 Filtered: HMM Sc=26.20 Sec struct Sc=7.60 * | * | * | * | * | * | * | Seq: TCCcCTGGTGGTCTAGTGCTtAGGATTCGGTGCTCTCACCGCTGCTGCCTGCGTTCGATTCCCGGTCAGGGAA Str: >>>.>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>.>.......<.<<<<<<<<<<. chr13.trna5 (41060809-41060738) Length: 72 bp Type: Glu Anticodon: TTC at 34-36 (41060776-41060774) Score: 72.5 HMM Sc=47.50 Sec struct Sc=25.00 * | * | * | * | * | * | * | Seq: TCCCATATGGTCTAGCGGTtAGGATTCCTGGTTTTCACCCAGGTGGCCCGGGTTCGACTCCCGGTATGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr13.trna6 (30674037-30673964) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (30674003-30674001) Score: 80.9 HMM Sc=55.20 Sec struct Sc=25.70 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAGGtTGGTGGTTCGAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna1 (20610132-20610213) Length: 82 bp Type: Leu Anticodon: AAG at 35-37 (20610166-20610168) Score: 74.8 HMM Sc=55.10 Sec struct Sc=19.70 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGCGGTctAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGgCGTGGGTTCGAATCCCACCGCTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<. chr14.trna2 (20625370-20625451) Length: 82 bp Type: Leu Anticodon: TAG at 35-37 (20625404-20625406) Score: 74.1 HMM Sc=54.10 Sec struct Sc=20.00 * | * | * | * | * | * | * | * | Seq: GGTAGTGTGGCCGAGCGGTctAAGGCGCTGGATTTAGGCTCCAGTCTCTTCGGGGgCGTGGGTTCGAATCCCACCACTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<. chr14.trna3 (20633006-20633077) Length: 72 bp Type: Pro Anticodon: TGG at 33-35 (20633038-20633040) Score: 74.9 HMM Sc=48.50 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna4 (20681690-20681762) Length: 73 bp Type: Thr Anticodon: TGT at 34-36 (20681723-20681725) Score: 78.0 HMM Sc=54.80 Sec struct Sc=23.20 * | * | * | * | * | * | * | Seq: GGCCCTATAGCTCAGGGGTtAGAGCACTGGTCTTGTAAACCAGGGGtCGCGAGTTCAAATCTCGCTGGGGCCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna5 (20683273-20683361) Length: 89 bp Type: Tyr Anticodon: GTA at 34-36 (20683306-20683308) Score: 75.5 Possible intron: 38-53 (20683310-20683325) HMM Sc=47.60 Sec struct Sc=27.90 * | * | * | * | * | * | * | * | * Seq: CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGtacttaatgtgtggtcATCCTTAGGtCGCTGGTTCGATTCCGGCTCGAAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>.......................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna6 (20684016-20684087) Length: 72 bp Type: Pro Anticodon: TGG at 33-35 (20684048-20684050) Score: 70.3 HMM Sc=43.90 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna7 (22929701-22929773) Length: 73 bp Type: Arg Anticodon: ACG at 34-36 (22929734-22929736) Score: 67.6 HMM Sc=45.90 Sec struct Sc=21.70 * | * | * | * | * | * | * | Seq: GGGCCAGTGGCGCAATGGAtAACGCGTCTGACTACGGATCAGAAGAtTCCAGGTTCGACTCCTGGCTGGCTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna8 (72962971-72963042) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (72963003-72963005) Score: 77.3 HMM Sc=57.00 Sec struct Sc=20.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCAAATCCGGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna9 (88979098-88979170) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (88979131-88979133) Score: 56.7 HMM Sc=35.80 Sec struct Sc=20.90 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGTGGTAGAGCGCTCGCTTAGCATGCGAGAGGtAGTGGGATCGATGCCCGCATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna10 (102317092-102317165) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (102317126-102317128) Score: 81.2 HMM Sc=64.80 Sec struct Sc=16.40 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACGGGCCA Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr14.trna11 (73588903-73588825) Length: 79 bp Type: Lys Anticodon: TTT at 40-42 (73588864-73588862) Score: 47.3 Filtered: HMM Sc=41.10 Sec struct Sc=6.20 * | * | * | * | * | * | * | * Seq: TAAAcaacccAGATAGCTCAGTTGATAGAGCATCAGACTTTTAATCTGAGGGtCCAGGGTTCATGTCCCTGTTCCTTAA Str: >>>........>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<..<<<. chr14.trna12 (58239967-58239895) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (58239934-58239932) Score: 88.0 HMM Sc=69.30 Sec struct Sc=18.70 * | * | * | * | * | * | * | Seq: GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGtCGTGGGTTCGAGCCCCACGTTGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna13 (31767683-31767609) Length: 75 bp Type: Glu Anticodon: TTC at 36-38 (31767648-31767646) Score: 21.5 Filtered, Possible pseudogene: HMM Sc=31.70 Sec struct Sc=-10.20 * | * | * | * | * | * | * | Seq: TCCacCCTGTGGTCTAGTGGCtAAGACTTTGTGCTTTCATTGCTGCAtCCTAGGTTCAATTCCCAGtCAGGGAAG Str: >.>..>>>>..>>>>........<<<<.>.>>>.......<<<.<....>>.>>.......<<.<<.<<<<<.<. chr14.trna14 (20677100-20677019) Length: 82 bp Type: Leu Anticodon: TAG at 35-37 (20677066-20677064) Score: 38.7 Filtered, Possible pseudogene: HMM Sc=35.60 Sec struct Sc=3.10 * | * | * | * | * | * | * | * | Seq: GGTAGTGTGGTTGAATGGTctAAGGCACTGAATTTAGGCTCCAGTCTCTTTGGGGaCGTGGGTTTAAATCCCACTGCTGCAA Str: .>>>>>>..>>>...........<<<.>>>.>.......<.<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<.. chr14.trna15 (20669259-20669174) Length: 86 bp Type: Tyr Anticodon: GTA at 34-36 (20669226-20669224) Score: 22.8 Possible intron: 38-49 (20669222-20669211) Filtered: HMM Sc=15.60 Sec struct Sc=7.20 * | * | * | * | * | * | * | * | * Seq: TCTTTGAGAGATCAGCTGATAGAGTGGAGGACTGTACacatctgtggacATCCTTAGGtTGCTGGTTCAATTCCTGCTTgAGGGAA Str: >>>>>>>..>.>>........<<.<.>>>>>...................<<<<<.....>>.>>.......<<.<<<<.<<<<<. chr14.trna16 (20663285-20663192) Length: 94 bp Type: Tyr Anticodon: GTA at 34-36 (20663252-20663250) Score: 75.3 Possible intron: 38-58 (20663248-20663228) HMM Sc=47.40 Sec struct Sc=27.90 * | * | * | * | * | * | * | * | * | Seq: CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGattgtacagacatttgcggacATCCTTAGGtCGCTGGTTCGATTCCGGCTCGAAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>............................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna17 (20660051-20659958) Length: 94 bp Type: Tyr Anticodon: GTA at 34-36 (20660018-20660016) Score: 74.3 Possible intron: 38-58 (20660014-20659994) HMM Sc=46.40 Sec struct Sc=27.90 * | * | * | * | * | * | * | * | * | Seq: CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGactgcggaaacgtttgtggacATCCTTAGGtCGCTGGTTCAATTCCGGCTCGAAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>............................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna18 (20657557-20657464) Length: 94 bp Type: Tyr Anticodon: GTA at 34-36 (20657524-20657522) Score: 75.3 Possible intron: 38-58 (20657520-20657500) HMM Sc=46.40 Sec struct Sc=28.90 * | * | * | * | * | * | * | * | * | Seq: CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGattgtatagacatttgcggacATCCTTAGGtCGCTGGTTCGATTCCAGCTCGAAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>............................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna19 (20653192-20653099) Length: 94 bp Type: Tyr Anticodon: GTA at 34-36 (20653159-20653157) Score: 75.3 Possible intron: 38-58 (20653155-20653135) HMM Sc=47.40 Sec struct Sc=27.90 * | * | * | * | * | * | * | * | * | Seq: CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGcctgtagaaacatttgtggacATCCTTAGGtCGCTGGTTCGATTCCGGCTCGAAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>............................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna20 (20631232-20631160) Length: 73 bp Type: Thr Anticodon: TGT at 34-36 (20631199-20631197) Score: 78.8 HMM Sc=54.70 Sec struct Sc=24.10 * | * | * | * | * | * | * | Seq: GGCTCCATAGCTCAGGGGTtAGAGCACTGGTCTTGTAAACCAGGGGtCGCGAGTTCAAATCTCGCTGGGGCCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna21 (20613862-20613790) Length: 73 bp Type: Thr Anticodon: TGT at 34-36 (20613829-20613827) Score: 80.0 HMM Sc=55.90 Sec struct Sc=24.10 * | * | * | * | * | * | * | Seq: GGCTCCATAGCTCAGGGGTtAGAGCGCTGGTCTTGTAAACCAGGGGtCGCGAGTTCAATTCTCGCTGGGGCCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna22 (20613472-20613401) Length: 72 bp Type: Pro Anticodon: AGG at 33-35 (20613440-20613438) Score: 70.2 HMM Sc=43.80 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr14.trna23 (20609407-20609336) Length: 72 bp Type: Pro Anticodon: AGG at 33-35 (20609375-20609373) Score: 70.2 HMM Sc=43.80 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr15.trna1 (45201151-45201222) Length: 72 bp Type: His Anticodon: GTG at 34-36 (45201184-45201186) Score: 60.1 HMM Sc=29.80 Sec struct Sc=30.30 * | * | * | * | * | * | * | Seq: GCCGTGATCGTATAGTGGTtAGTACTCTGCGTTGTGGCCGCAGCAaCCTCGGTTCGAATCCGAGTCACGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr15.trna2 (78860562-78860634) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (78860595-78860597) Score: 88.0 HMM Sc=69.30 Sec struct Sc=18.70 * | * | * | * | * | * | * | Seq: GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGtCGTGGGTTCGAGCCCCACGTTGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr15.trna3 (79744655-79744727) Length: 73 bp Type: Cys Anticodon: GCA at 34-36 (79744688-79744690) Score: 78.7 HMM Sc=58.50 Sec struct Sc=20.20 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGTGGGtAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCAAATCCGGGTGCCCCCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr15.trna4 (89335073-89335145) Length: 73 bp Type: Arg Anticodon: TCG at 34-36 (89335106-89335108) Score: 74.8 HMM Sc=55.10 Sec struct Sc=19.70 * | * | * | * | * | * | * | Seq: GGCCGCGTGGCCTAATGGAtAAGGCGTCTGACTTCGGATCAGAAGAtTGCAGGTTCGAGTCCTGCCGCGGTCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr15.trna5 (95784645-95784717) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (95784678-95784680) Score: 35.4 Filtered, Possible truncation, pseudogene: HMM Sc=31.20 Sec struct Sc=4.20 * | * | * | * | * | * | * | Seq: GCaCTGCACAGTCAGTcagtAGAGCATGGGACTCTTAATCCCAGGGtCGTGGGTTCAAGCCCCACGTTGGGCG Str: >>.>>>>.>............<.<<.>>>>>.......<<<<<.....>>>>>.......<<<<<...<<<<. chr15.trna6 (76382497-76382424) Length: 74 bp Type: Lys Anticodon: CTT at 34-36 (76382464-76382462) Score: 35.8 Filtered, Possible pseudogene: HMM Sc=42.80 Sec struct Sc=-7.00 * | * | * | * | * | * | * | Seq: GCCTGGCTACCTCAGTTGGTAGAGCATGGGACTCTTAATCCCAGAGtcAGTGGGTTCAAGCCTCACATTGAGTG Str: >>.>>>....>>>........<<<..>>>>>.......<<<<<......>>>>>.......<<<<<.<<<.<<. chr15.trna7 (65869133-65869062) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (65869100-65869098) Score: 71.5 HMM Sc=44.00 Sec struct Sc=27.50 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTtAGCACTCTGGACTCTGAATCCAGCGaTCCGAGTTCAAATCTCGGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr15.trna8 (45200484-45200413) Length: 72 bp Type: His Anticodon: GTG at 34-36 (45200451-45200449) Score: 60.1 HMM Sc=29.80 Sec struct Sc=30.30 * | * | * | * | * | * | * | Seq: GCCGTGATCGTATAGTGGTtAGTACTCTGCGTTGTGGCCGCAGCAaCCTCGGTTCGAATCCGAGTCACGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr15.trna9 (45198677-45198606) Length: 72 bp Type: His Anticodon: GTG at 34-36 (45198644-45198642) Score: 60.1 HMM Sc=29.80 Sec struct Sc=30.30 * | * | * | * | * | * | * | Seq: GCCGTGATCGTATAGTGGTtAGTACTCTGCGTTGTGGCCGCAGCAaCCTCGGTTCGAATCCGAGTCACGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr15.trna10 (40593906-40593825) Length: 82 bp Type: Ser Anticodon: GCT at 34-36 (40593873-40593871) Score: 88.4 HMM Sc=61.60 Sec struct Sc=26.80 * | * | * | * | * | * | * | * | Seq: GACGAGGTGGCCGAGTGGTtAAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCATCCTCGTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr15.trna11 (26082305-26082234) Length: 72 bp Type: Glu Anticodon: TTC at 34-36 (26082272-26082270) Score: 71.2 HMM Sc=46.50 Sec struct Sc=24.70 * | * | * | * | * | * | * | Seq: TCCCACATGGTCTAGCGGTtAGGATTCCTGGTTTTCACCCAGGCGGCCCGGGTTCGACTCCCGGTGTGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr16.trna1 (2927661-2927733) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (2927694-2927696) Score: 46.8 Filtered: HMM Sc=40.20 Sec struct Sc=6.60 * | * | * | * | * | * | * | Seq: CCCCGGCTGGCTCAGTCAGTAGATCATGAGACTCTTAATCTCAGGGtCGTGGGTTCACGCCCCACACTGGGCG Str: .>>>>>...>.>>........<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<<.. chr16.trna2 (3150674-3150746) Length: 73 bp Type: Arg Anticodon: CCG at 34-36 (3150707-3150709) Score: 67.0 HMM Sc=49.40 Sec struct Sc=17.60 * | * | * | * | * | * | * | Seq: GGCCGCGTGGCCTAATGGAtAAGGCGTCTGATTCCGGATCAGAAGAtTGAGGGTTCGAGTCCCTTCGTGGTCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna3 (3152900-3152972) Length: 73 bp Type: Arg Anticodon: CCT at 34-36 (3152933-3152935) Score: 71.7 HMM Sc=56.30 Sec struct Sc=15.40 * | * | * | * | * | * | * | Seq: GCCCCGGTGGCCTAATGGAtAAGGCATTGGCCTCCTAAGCCAGGGAtTGTGGGTTCGAGTCCCACCCGGGGTA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna4 (3158922-3158993) Length: 72 bp Type: Pro Anticodon: TGG at 33-35 (3158954-3158956) Score: 70.3 HMM Sc=43.90 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna5 (3160385-3160479) Length: 95 bp Type: Pro Anticodon: AGG at 33-35 (3160417-3160419) Score: 36.6 Possible intron: 37-52 (3160421-3160436) Filtered: HMM Sc=30.40 Sec struct Sc=6.20 * | * | * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTGTGGTTCTCGCTTAGGGaccacagggacaagccCGGGAGACCCAAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>.>.......................<.<<<.>.>..<.<...>>>>>.......<<<<<<<<<<<<. chr16.trna6 (3164938-3165010) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (3164971-3164973) Score: 57.8 HMM Sc=44.60 Sec struct Sc=13.20 * | * | * | * | * | * | * | Seq: GCCTGGCTAGCTCAGTCGGCAAAGCATGAGACTCTTAATCTCAGGGtCGTGGGCTCGAGCTCCATGTTGGGCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna7 (3172048-3172119) Length: 72 bp Type: Pro Anticodon: CGG at 33-35 (3172080-3172082) Score: 70.2 HMM Sc=43.80 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTCGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna8 (3175691-3175763) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (3175724-3175726) Score: 87.8 HMM Sc=68.80 Sec struct Sc=19.00 * | * | * | * | * | * | * | Seq: GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGtCGTGGGTTCGAGCCCCACGTTGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna9 (3188094-3188165) Length: 72 bp Type: Pro Anticodon: TGG at 33-35 (3188126-3188128) Score: 70.3 HMM Sc=43.90 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna10 (3189634-3189705) Length: 72 bp Type: Pro Anticodon: AGG at 33-35 (3189666-3189668) Score: 70.2 HMM Sc=43.80 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna11 (3191501-3191573) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (3191534-3191536) Score: 82.3 HMM Sc=69.10 Sec struct Sc=13.20 * | * | * | * | * | * | * | Seq: GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCTCAGGGtCGTGGGTTCGAGCCCCACGTTGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna12 (3191989-3192060) Length: 72 bp Type: Pro Anticodon: AGG at 33-35 (3192021-3192023) Score: 71.5 HMM Sc=45.10 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna13 (3193918-3193990) Length: 73 bp Type: Arg Anticodon: CCT at 34-36 (3193951-3193953) Score: 54.7 HMM Sc=36.70 Sec struct Sc=18.00 * | * | * | * | * | * | * | Seq: GCCCCAGTGGCCTGATGGAtAAGGTACTGGCCTCCTAAGCCAGGGAtTGTGGGTTCGAGTTCCACCTGGGGTA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna14 (3196153-3196225) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (3196186-3196188) Score: 48.5 Filtered, Possible pseudogene: HMM Sc=54.70 Sec struct Sc=-6.20 * | * | * | * | * | * | * | Seq: GCCCAGCTAGCTCAGCCGGTAGAGCACAAGACTCTTAATCTCAGGGtCGTGGGTTTGAGCCCTGTGTTGAGCA Str: >>.>>>>..>>>>........<<<<...>>>.......<<<.......>>>>>.......<<<<<<<<<.<<. chr16.trna16 (14285893-14285964) Length: 72 bp Type: Thr Anticodon: CGT at 33-35 (14285925-14285927) Score: 79.6 HMM Sc=56.00 Sec struct Sc=23.60 * | * | * | * | * | * | * | Seq: GGCGCGGTGGCCAAGTGGTAAGGCGTCGGTCTCGTAAACCGAAGAtCACGGGTTCGAACCCCGTCCGTGCCT Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna17 (22297140-22297221) Length: 82 bp Type: Leu Anticodon: AAG at 35-37 (22297174-22297176) Score: 74.8 HMM Sc=55.10 Sec struct Sc=19.70 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGCGGTctAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGgCGTGGGTTCGAATCCCACCGCTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<. chr16.trna18 (57299951-57300033) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (57299985-57299987) Score: 77.3 HMM Sc=47.50 Sec struct Sc=29.80 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGCGGTctAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTTCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr16.trna19 (70788694-70788764) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (70788726-70788728) Score: 54.7 HMM Sc=44.30 Sec struct Sc=10.40 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCATGCGGGCGGCCGGGCTTCGATTCCTGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>.>>.........<<.<<<<<<<<. chr16.trna20 (70789507-70789577) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (70789539-70789541) Score: 81.0 HMM Sc=59.90 Sec struct Sc=21.10 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr16.trna21 (71426493-71426565) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (71426526-71426528) Score: 82.7 HMM Sc=58.80 Sec struct Sc=23.90 * | * | * | * | * | * | * | Seq: GCCCTCTTAGCGCAGTGGGcAGCGCGTCAGTCTCATAATCTGAAGGtCCTGAGTTCGAGCCTCAGAGAGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna22 (87384094-87384022) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (87384061-87384059) Score: 77.4 HMM Sc=56.10 Sec struct Sc=21.30 * | * | * | * | * | * | * | Seq: GCCTCGTTAGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGtCGTGAGTTCGAGCCTCACACGGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna23 (80445631-80445555) Length: 77 bp Type: Ala Anticodon: GGC at 39-41 (80445593-80445591) Score: 38.2 Filtered: HMM Sc=28.40 Sec struct Sc=9.80 * | * | * | * | * | * | * | * Seq: GGTGAGTGtGCTTtcaggatGTGGAAGAGCACTGGGCTGGCCATCCAGAGtCCCAGGTTCAAGTCCTGGCTCGACCT Str: >>>>>>...>>>>.............<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<.<<. chr16.trna24 (73478389-73478317) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (73478356-73478354) Score: 89.0 HMM Sc=67.80 Sec struct Sc=21.20 * | * | * | * | * | * | * | Seq: GCCTGGATAGCTCAGTTGGTAGAGCATCAGACTTTTAATCTGAGGGtCCAGGGTTCAAGTCCCTGTTCAGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna25 (70779109-70779039) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (70779077-70779075) Score: 81.0 HMM Sc=59.90 Sec struct Sc=21.10 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr16.trna26 (70778281-70778211) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (70778249-70778247) Score: 75.0 HMM Sc=55.60 Sec struct Sc=19.40 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTTGATTCCCGGCCAGTGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr16.trna27 (57300562-57300480) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (57300528-57300526) Score: 77.3 HMM Sc=47.50 Sec struct Sc=29.80 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGCGGTctAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTTCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr16.trna28 (22195792-22195711) Length: 82 bp Type: Leu Anticodon: TAG at 35-37 (22195758-22195756) Score: 73.9 HMM Sc=57.10 Sec struct Sc=16.80 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGTGGTctAAGGCGCTGGATTTAGGCTCCAGTCATTTCGATGgCGTGGGTTCGAATCCCACCGCTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>....<<...>>>>>.......<<<<<<<<<<<<. chr16.trna29 (3184204-3184133) Length: 72 bp Type: Pro Anticodon: TGG at 33-35 (3184172-3184170) Score: 70.3 HMM Sc=43.90 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna30 (3182706-3182635) Length: 72 bp Type: Pro Anticodon: AGG at 33-35 (3182674-3182672) Score: 70.2 HMM Sc=43.80 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna31 (3180626-3180554) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (3180593-3180591) Score: 69.3 HMM Sc=55.00 Sec struct Sc=14.30 * | * | * | * | * | * | * | Seq: GCCCGGCTAGCTCAGTCGATAGAGCATGAGACTCTTAATCTCAGGGtCGTGGGTTCGAGCCGCACGTTGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>.>.......<.<<<<<<<<<<. chr16.trna32 (3171030-3170960) Length: 71 bp Type: Pro Anticodon: TGG at 33-35 (3170998-3170996) Score: 27.6 Filtered, Possible pseudogene: HMM Sc=29.60 Sec struct Sc=-2.00 * | * | * | * | * | * | * | Seq: GGCCTGTTGGTCTAGAGGTATGATTCTCGCTTTGGGTGCGAGAGGCCCCGGTGCGAGTCCCAGAGGAGCCC Str: >>>.>.>..>>>.........<<<.>>>>>.......<<<<<....>..>>.......<<..<<.<.<<<. chr16.trna33 (3157477-3157405) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (3157444-3157442) Score: 83.1 HMM Sc=64.20 Sec struct Sc=18.90 * | * | * | * | * | * | * | Seq: GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCCTTAATCTCAGGGtCGTGGGTTCGAGCCCCACGTTGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr16.trna34 (636806-636736) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (636774-636772) Score: 75.1 HMM Sc=46.00 Sec struct Sc=29.10 * | * | * | * | * | * | * | Seq: GCGCCGCTGGTGTAGTGGTATCATGCAAGATTCCCATTCTTGCGaCCCGGGTTCGATTCCCGGGCGGCGCA Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr17.trna1 (8119155-8119227) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (8119188-8119190) Score: 87.8 HMM Sc=67.30 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGtCCAGGGTTCAAGTCCCTGTTCGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna2 (8119752-8119823) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (8119785-8119787) Score: 71.5 HMM Sc=44.00 Sec struct Sc=27.50 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTtAGCACTCTGGACTCTGAATCCAGCGaTCCGAGTTCAAATCTCGGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr17.trna3 (8120925-8121012) Length: 88 bp Type: Arg Anticodon: TCT at 34-36 (8120958-8120960) Score: 70.8 Possible intron: 38-52 (8120962-8120976) HMM Sc=50.50 Sec struct Sc=20.30 * | * | * | * | * | * | * | * | * Seq: GGCTCTGTGGCGCAATGGAtAGCGCATTGGACTTCTAgtgacgaatagagcaATTCAAAGGtTGTGGGTTCGAATCCCACCAGAGTCG Str: >>>>>>>..>>>>........<<<<.>>>>>......................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna4 (8125746-8125816) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (8125778-8125780) Score: 81.0 HMM Sc=59.90 Sec struct Sc=21.10 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr17.trna5 (8186358-8186429) Length: 72 bp Type: Trp Anticodon: CCA at 33-35 (8186390-8186392) Score: 73.3 HMM Sc=50.60 Sec struct Sc=22.70 * | * | * | * | * | * | * | Seq: GACCTCGTGGCGCAACGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCAAATCACGTCGGGGTCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna6 (8186866-8186947) Length: 82 bp Type: Ser Anticodon: GCT at 34-36 (8186899-8186901) Score: 88.4 HMM Sc=61.60 Sec struct Sc=26.80 * | * | * | * | * | * | * | * | Seq: GACGAGGTGGCCGAGTGGTtAAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCATCCTCGTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr17.trna7 (8187160-8187233) Length: 74 bp Type: Thr Anticodon: AGT at 35-37 (8187194-8187196) Score: 82.6 HMM Sc=61.60 Sec struct Sc=21.00 * | * | * | * | * | * | * | Seq: GGCGCCGTGGCTTAGTTGGTtAAAGCGCCTGTCTAGTAAACAGGAGAtCCTGGGTTCGAATCCCAGCGGTGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna8 (8187593-8187666) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (8187627-8187629) Score: 81.2 HMM Sc=64.80 Sec struct Sc=16.40 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACGGGCCA Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr17.trna9 (8221548-8221619) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (8221581-8221583) Score: 73.8 HMM Sc=49.30 Sec struct Sc=24.50 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTATAGTGGTaAGCATAGCTGCCTTCCAAGCAGTTGaCCCGGGTTCGATTCCCGGCCAACGCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr17.trna10 (19508181-19508252) Length: 72 bp Type: Trp Anticodon: CCA at 33-35 (19508213-19508215) Score: 75.1 HMM Sc=52.40 Sec struct Sc=22.70 * | * | * | * | * | * | * | Seq: GACCTCGTGGCGCAATGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCAAGTCACGTCGGGGTCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna11 (19860862-19860932) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (19860894-19860896) Score: 68.3 HMM Sc=51.50 Sec struct Sc=16.80 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAATGGTAGAATTCTCGCCTCCCACGCAGGAGaCCCAGGTTCGATTCCTGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>.>>.......<<.<<....>>>>>.......<<<<<<<<<<<<. chr17.trna12 (31550074-31550145) Length: 72 bp Type: Thr Anticodon: CGT at 33-35 (31550106-31550108) Score: 78.3 HMM Sc=58.20 Sec struct Sc=20.10 * | * | * | * | * | * | * | Seq: GGCGCGGTGGCCAAGTGGTAAGGCGTCGGTCTCGTAAACCGAAGAtCGCGGGTTCGAACCCCGTCCGTGCCT Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna13 (38867645-38867716) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (38867677-38867679) Score: 81.9 HMM Sc=61.60 Sec struct Sc=20.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCAAATCCGGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna14 (49192528-49192599) Length: 72 bp Type: Gln Anticodon: TTG at 34-36 (49192561-49192563) Score: 72.6 HMM Sc=45.70 Sec struct Sc=26.90 * | * | * | * | * | * | * | Seq: GGTCCCATGGTGTAATGGTtAGCACTCTGGACTTTGAATCCAGCGaTCCGAGTTCAAATCTCGGTGGGACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr17.trna15 (60786232-60786302) Length: 71 bp Type: Sup Anticodon: TTA at 33-35 (60786264-60786266) Score: 57.1 Filtered: HMM Sc=50.00 Sec struct Sc=7.10 * | * | * | * | * | * | * | Seq: GCCCGGATAGTTCAGTTGGTAGAGCATCAGACTTAATCAGAGGGtCCAGGGTTCAAGTCCCTGTTTGGGTG Str: >>>>>>>..>>>>........<<<<.>>.>>.....<<.<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna16 (75033906-75033978) Length: 73 bp Type: Arg Anticodon: CCT at 34-36 (75033939-75033941) Score: 72.3 HMM Sc=54.00 Sec struct Sc=18.30 * | * | * | * | * | * | * | Seq: GCCCCAGTGGCCTAATGGAtAAGGCACTGGCCTCCTAAGCCAGGGAtTGTGGGTTCGAGTCCCACCTGGGGTA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna17 (75035113-75035185) Length: 73 bp Type: Arg Anticodon: TCG at 34-36 (75035146-75035148) Score: 68.8 HMM Sc=48.90 Sec struct Sc=19.90 * | * | * | * | * | * | * | Seq: GACCGCGTGGCCTAATGGAtAAGGCGTCTGACTTCGGATCAGAAGAtTGAGGGTTCGAGTCCCTTCGTGGTCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna18 (82494792-82494721) Length: 72 bp Type: iMet Anticodon: CAT at 33-35 (82494760-82494758) Score: 60.4 HMM Sc=30.80 Sec struct Sc=29.60 * | * | * | * | * | * | * | Seq: AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGtCGATGGATCGAAACCATCCTCTGCTA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna19 (75034503-75034431) Length: 73 bp Type: Arg Anticodon: CCT at 34-36 (75034470-75034468) Score: 71.1 HMM Sc=52.80 Sec struct Sc=18.30 * | * | * | * | * | * | * | Seq: GCCCCAGTGGCCTAATGGAtAAGGCACTGGCCTCCTAAGCCAGGGAtTGTGGGTTCGAGTCCCACCTGGGGTG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna20 (68394890-68394816) Length: 75 bp Type: Cys Anticodon: GCA at 36-38 (68394855-68394853) Score: 33.6 Filtered: HMM Sc=24.70 Sec struct Sc=8.90 * | * | * | * | * | * | * | Seq: GGCAGAATGGTGCAGCGGTtcAGCACCCAgGCTCTGCAGcCAGCTGTTGCCTGGGCTCAAATCCCAGCTCTGCCA Str: >>>>>>...>>>>.........<<<<.>>.>>>........<<<<<....>>>>>.......<<<<<.<<<<<<. chr17.trna21 (68019969-68019897) Length: 73 bp Type: Arg Anticodon: CCG at 34-36 (68019936-68019934) Score: 64.9 HMM Sc=47.20 Sec struct Sc=17.70 * | * | * | * | * | * | * | Seq: GACCCAGTGGCCTAATGGAtAAGGCATCAGCCTCCGGAGCTGGGGAtTGTGGGTTCGAGTCCCATCTGGGTCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna22 (64530873-64530800) Length: 74 bp Type: Thr Anticodon: AGT at 35-37 (64530839-64530837) Score: 44.3 Filtered: HMM Sc=27.60 Sec struct Sc=16.70 * | * | * | * | * | * | * | Seq: AGCACCATGGCTTAGCTGGTtAAAGCACCTGTCTAGTAAACAGGAGAtCCTGAGtTTCAATTCCAATGGTGCCT Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<......>>...........<<.<<<<<<.. chr17.trna23 (40117373-40117300) Length: 74 bp Type: Sup Anticodon: TCA at 35-37 (40117339-40117337) Score: 48.8 Filtered: HMM Sc=35.70 Sec struct Sc=13.10 * | * | * | * | * | * | * | Seq: GACCGTGTGGCCtTAATGGAtAAGGTGTCTGACTTCAGATCAGAAGAtTGAGGGTTTGAGTCCCTTTGTGGTCA Str: >>>>>>>..>>>.>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna24 (40082752-40082680) Length: 73 bp Type: Val Anticodon: TAC at 34-36 (40082719-40082717) Score: 32.5 Filtered, Possible pseudogene: HMM Sc=27.70 Sec struct Sc=4.80 * | * | * | * | * | * | * | Seq: GATTCTATAGTGTAGCAGTtATCACATCTGCTTTACATGCAGAAGGtCCTAGGTTTGAGCCGCGGTGGAACCA Str: >.>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>..>.......<..<<<<<<<.<. chr17.trna25 (39154562-39154491) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (39154530-39154528) Score: 81.9 HMM Sc=61.60 Sec struct Sc=20.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCAAATCCGGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna26 (39153805-39153734) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (39153773-39153771) Score: 81.9 HMM Sc=61.60 Sec struct Sc=20.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCAAATCCGGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna27 (38869363-38869292) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (38869331-38869329) Score: 81.8 HMM Sc=62.50 Sec struct Sc=19.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCTGGTTCAAATCCGGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna28 (38861755-38861684) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (38861723-38861721) Score: 71.6 HMM Sc=51.40 Sec struct Sc=20.20 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAAGtCCCCGGTTCAAATCCGGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna29 (38833793-38833722) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (38833761-38833759) Score: 47.6 Filtered: HMM Sc=37.50 Sec struct Sc=10.10 * | * | * | * | * | * | * | Seq: GGGGGTAGGGCTCAGGGATAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCGAATCTAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<. chr17.trna30 (38751854-38751781) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (38751820-38751818) Score: 80.9 HMM Sc=55.20 Sec struct Sc=25.70 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAGGtTGGTGGTTCGAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna32 (8227064-8226991) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (8227030-8227028) Score: 81.2 HMM Sc=64.80 Sec struct Sc=16.40 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGAACCCCGTACGGGCCA Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr17.trna33 (8226691-8226610) Length: 82 bp Type: Ser Anticodon: AGA at 34-36 (8226658-8226656) Score: 89.6 HMM Sc=56.90 Sec struct Sc=32.70 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACTACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr17.trna34 (8226308-8226235) Length: 74 bp Type: Thr Anticodon: AGT at 35-37 (8226274-8226272) Score: 82.6 HMM Sc=61.60 Sec struct Sc=21.00 * | * | * | * | * | * | * | Seq: GGCGCCGTGGCTTAGTTGGTtAAAGCGCCTGTCTAGTAAACAGGAGAtCCTGGGTTCGAATCCCAGCGGTGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna35 (8222904-8222833) Length: 72 bp Type: Pro Anticodon: CGG at 33-35 (8222872-8222870) Score: 70.2 HMM Sc=43.80 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTCGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna36 (8222309-8222238) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (8222276-8222274) Score: 66.5 HMM Sc=35.70 Sec struct Sc=30.80 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr17.trna37 (8220940-8220869) Length: 72 bp Type: Trp Anticodon: CCA at 33-35 (8220908-8220906) Score: 73.4 HMM Sc=53.00 Sec struct Sc=20.40 * | * | * | * | * | * | * | Seq: GGCCTCGTGGCGCAACGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCAAATCACGTCGGGGTCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna38 (8206159-8206073) Length: 87 bp Type: Ile Anticodon: AAT at 48-50 (8206112-8206110) Score: 20.5 Filtered, Possible truncation, pseudogene: HMM Sc=21.90 Sec struct Sc=-1.40 * | * | * | * | * | * | * | * | * Seq: GactcTGTCTCAaaaaaaaaaaaaaaaaATGGTtAGAGTGTGGTGCTAATAACCCCAAGGtCGCAGGTTTGATCCCTGTAGGGGCCA Str: >.......>>>........................<<<..>>>.>.......<.<<<.....>>>>>.......<<<<<......<. chr17.trna39 (8139525-8139452) Length: 74 bp Type: Thr Anticodon: AGT at 35-37 (8139491-8139489) Score: 80.1 HMM Sc=59.10 Sec struct Sc=21.00 * | * | * | * | * | * | * | Seq: GGCGCCGTGGCTTAGCTGGTtAAAGCGCCTGTCTAGTAAACAGGAGAtCCTGGGTTCGAATCCCAGCGGTGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr17.trna40 (8138962-8138881) Length: 82 bp Type: Ser Anticodon: CGA at 34-36 (8138929-8138927) Score: 95.1 HMM Sc=66.10 Sec struct Sc=29.00 * | * | * | * | * | * | * | * | Seq: GCTGTGATGGCCGAGTGGTtAAGGCGTTGGACTCGAAATCCAATGGGGTCTCCCCGCGCAGGTTCGAATCCTGCTCACAGCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr17.trna41 (8120395-8120314) Length: 82 bp Type: Leu Anticodon: TAG at 35-37 (8120361-8120359) Score: 75.2 HMM Sc=53.50 Sec struct Sc=21.70 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGCGGTctAAGGCGCTGGATTTAGGCTCCAGTCTCTTCGGAGGCGTGGGTTCGAATCCCACCGCTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<. chr18.trna1 (57678622-57678693) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (57678655-57678657) Score: 28.8 Filtered, Possible pseudogene: HMM Sc=35.60 Sec struct Sc=-6.80 * | * | * | * | * | * | * | Seq: GTGTTGATGGTATAGTGGTgAGCATAGCTGCCTTCCAAGCAATTGaCCCGACTTCGATTCCCAGCCAATGCA Str: >>>>>>...>>.>........<.<<.>.>>>.......<<<.<....>.>...........<.<.<<<<<<. chr18.trna2 (57678945-57679016) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (57678978-57678980) Score: 28.8 Filtered, Possible pseudogene: HMM Sc=33.70 Sec struct Sc=-4.90 * | * | * | * | * | * | * | Seq: GTGTTGATGGTATAGTGGTgAGCATAGCTGCCTTCCAAGCAATTGaCCCGACTTCAATTCCCAGCCAACGCA Str: >>>>>>...>>.>........<.<<.>.>>>.......<<<.<....>.>...........<.<.<<<<<<. chr18.trna3 (46089377-46089305) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (46089344-46089342) Score: 63.1 Filtered: HMM Sc=58.60 Sec struct Sc=4.50 * | * | * | * | * | * | * | Seq: GACGAGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGtCGTGGGTTTGAGCCCCATGTTGGGCA Str: >.>.>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<.<. chr19.trna1 (1383563-1383636) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (1383597-1383599) Score: 80.9 HMM Sc=55.20 Sec struct Sc=25.70 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAGGtTGGTGGTTCGAGCCCACCCAGGGACG Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr19.trna2 (4724070-4724141) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (4724103-4724105) Score: 73.8 HMM Sc=49.30 Sec struct Sc=24.50 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTATAGTGGTtAGCATAGCTGCCTTCCAAGCAGTTGaCCCGGGTTCGATTCCCGGCCAACGCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr19.trna3 (12188561-12188634) Length: 74 bp Type: Ala Anticodon: GGC at 35-37 (12188595-12188597) Score: 37.8 Filtered: HMM Sc=22.40 Sec struct Sc=15.40 * | * | * | * | * | * | * | Seq: GGCTCTGTGGCTTTGTGGGTtAAAGTACTTGTCTGGCAAACAGGAGAtGCTGGAtTTCAATCCCAGCAGGGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>.........<<<<<<<<<<<. chr19.trna4 (33177057-33177130) Length: 74 bp Type: Thr Anticodon: AGT at 35-37 (33177091-33177093) Score: 82.6 HMM Sc=61.60 Sec struct Sc=21.00 * | * | * | * | * | * | * | Seq: GGCGCCGTGGCTTAGTTGGTtAAAGCGCCTGTCTAGTAAACAGGAGAtCCTGGGTTCGAATCCCAGCGGTGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr19.trna5 (35575848-35575920) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (35575881-35575883) Score: 54.8 HMM Sc=42.40 Sec struct Sc=12.40 * | * | * | * | * | * | * | Seq: GCCCAGCTAGCTCAGTCGGTAGAGCATAAGACTCTTAATCTCAGGGtTGTGGATTCGTGCCCCATGCTGGGTG Str: >>>>>>>..>>>>........<<<<.>.>>>.......<<<.<.....>>>>.........<<<<<<<<<<<. chr19.trna6 (51922213-51922140) Length: 74 bp Type: Lys Anticodon: CTT at 32-34 (51922182-51922180) Score: 56.6 * | * | * | * | * | * | * | Seq: GCAGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGtCATGGGTTCGTGCCCCATGTTGGGtgcCA Str: >>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<.....<. chr19.trna7 (49534748-49534676) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (49534715-49534713) Score: 53.8 Filtered, Possible pseudogene: HMM Sc=49.90 Sec struct Sc=3.90 * | * | * | * | * | * | * | Seq: ACCTGGGTAGCTTAGTTGGTAGAGCATTGGACTTTTAATTTGAGGGcCCAGGTTTCAAGTCCCTGTTTGGGTG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>.........<<<<<<<<<<<. chr19.trna8 (45478687-45478601) Length: 87 bp Type: SeC Anticodon: TCA at 36-38 (45478652-45478650) Score: 146.9 HMM Sc=0.00 Sec struct Sc=0.00 * | * | * | * | * | * | * | * | * Seq: GCCCGGATGATCCTCAGTGGTCTGGGGTGCAGGCTTCAAACCTGTAGCTGTCTAGCGACAGAGTGGTTCAATTCCACCTTTCGGGCG Str: >>>>>>>.>..>>>>>>....<<<<<<>>>>>>.......<<<<<<.>>>>>....<<<<<.>>>>.......<<<<<.<<<<<<<. chr19.trna9 (41242309-41242237) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (41242276-41242274) Score: 49.9 Filtered, Possible pseudogene: HMM Sc=54.00 Sec struct Sc=-4.10 * | * | * | * | * | * | * | Seq: GCCAGGATAGTTCAGGTGGTAGAGCATCAGACTTTTAACCTGAGGGtTCAGGGTTCAAGTCTCTGTTTGGGCG Str: >>>.>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<.<<<. chr19.trna10 (39412260-39412168) Length: 93 bp Type: Ile Anticodon: TAT at 35-37 (39412226-39412224) Score: 73.8 Possible intron: 39-57 (39412222-39412204) HMM Sc=45.60 Sec struct Sc=28.20 * | * | * | * | * | * | * | * | * | Seq: GCTCCAGTGGCGCAATCGGTtAGCGCGCGGTACTTATAtgacagtgcgagcggagcaATGCCGAGGtTGTGAGTTCGATCCTCACCTGGAGCA Str: >>>>>>>..>>>>.........<<<<.>>>>>..........................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr19.trna11 (4724707-4724635) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (4724674-4724672) Score: 79.2 HMM Sc=49.10 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGCGGTtATCACATTCGCCTCACACGCGAAAGGtCCCCGGTTCGATCCCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr19.trna12 (1383434-1383362) Length: 73 bp Type: Phe Anticodon: GAA at 34-36 (1383401-1383399) Score: 88.9 HMM Sc=68.40 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGtCCCTGGTTCGATCCCGGGTTTCGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr1_KI270713v1_random.trna1 (31706-31635) Length: 72 bp Type: Glu Anticodon: TTC at 34-36 (31673-31671) Score: 63.9 HMM Sc=43.90 Sec struct Sc=20.00 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGCtAGGATTCGGCGCTTTCACCGCTGCGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr1_KI270713v1_random.trna2 (28828-28755) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (28794-28792) Score: 68.7 HMM Sc=53.50 Sec struct Sc=15.20 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCGCAGTCGGTtAGCGCGTTCGGCTGTTAACCGGAAGGtTGGTGGTTCGAGACCACCCAAGGACG Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr2.trna1 (11551707-11551767) Length: 61 bp Type: Gly Anticodon: CCC at 28-30 (11551734-11551736) Score: 36.5 Filtered: HMM Sc=15.40 Sec struct Sc=21.10 * | * | * | * | * | * | Seq: GTGGTCTAGTGGTtAGGATTCAGCGCTCCCACCGCCGCAgCCCGGGTTCGATTCCCGGtCA Str: >..>>>>........<<<<.>.>>>.......<<<.<....>>>>>.......<<<<<.<. chr2.trna2 (27050782-27050870) Length: 89 bp Type: Tyr Anticodon: GTA at 34-36 (27050815-27050817) Score: 77.9 Possible intron: 38-53 (27050819-27050834) HMM Sc=50.10 Sec struct Sc=27.80 * | * | * | * | * | * | * | * | * Seq: CCTTCGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGtggatagggcgtggcaATCCTTAGGtCGCTGGTTCGATTCCGGCTCGAAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>.......................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr2.trna3 (27051214-27051286) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (27051247-27051249) Score: 59.7 HMM Sc=36.10 Sec struct Sc=23.60 * | * | * | * | * | * | * | Seq: GGGGGATTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtAGCGGGATCGATGCCCGCATCCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr2.trna4 (30054702-30054774) Length: 73 bp Type: Leu Anticodon: AAG at 34-36 (30054735-30054737) Score: 37.7 Filtered: HMM Sc=23.60 Sec struct Sc=14.10 * | * | * | * | * | * | * | Seq: GGGCCAGTGGCTCAATGGAtAATGCGTCTGACTAAGAATCAGAAGAtTCCAGCCTTGACTCCTGGCTGGCTCA Str: >>>>>>>..>>............<<.>>>>>.......<<<<<.....>>>>.........<<<<<<<<<<<. chr2.trna5 (42810536-42810628) Length: 93 bp Type: Ile Anticodon: TAT at 35-37 (42810570-42810572) Score: 73.2 Possible intron: 39-57 (42810574-42810592) HMM Sc=45.00 Sec struct Sc=28.20 * | * | * | * | * | * | * | * | * | Seq: GCTCCAGTGGCGCAATCGGTtAGCGCGCGGTACTTATAcagcagtacatgcagagcaATGCCGAGGtTGTGAGTTCGAGCCTCACCTGGAGCA Str: >>>>>>>..>>>>.........<<<<.>>>>>..........................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr2.trna6 (74896919-74896991) Length: 73 bp Type: Sup Anticodon: TCA at 33-35 (74896951-74896953) Score: 21.3 Filtered, Possible pseudogene: HMM Sc=25.80 Sec struct Sc=-4.50 * | * | * | * | * | * | * | Seq: GcctgTGGTCTAGTGGTtAGAATTcAGTGTTTTCAGTGCTCTAGTCCAGGTTCAATTCCTGGtcaGGGAACCA Str: >......>>.>........<.<<..>>.>>.......<<.<<...>>>>>.......<<<<<.........<. chr2.trna7 (84858752-84858824) Length: 73 bp Type: Val Anticodon: TAC at 34-36 (84858785-84858787) Score: 47.6 Filtered: HMM Sc=29.80 Sec struct Sc=17.80 * | * | * | * | * | * | * | Seq: GGTTCCATAGTGTAACAGTtATCATGTCTGCTTTACACACTGAAGGtCCTGGGTTCAAACTCCAGTGGAACCA Str: >>>>>>>..>>>..........<<<.>>.>.........<.<<.....>>>>>.......<<<<<<<<<<<<. chr2.trna8 (87112450-87112521) Length: 72 bp Type: Pro Anticodon: AGG at 33-35 (87112482-87112484) Score: 28.9 Filtered, Possible pseudogene: HMM Sc=28.30 Sec struct Sc=0.60 * | * | * | * | * | * | * | Seq: GGCTGGTTGGTCTAGGGCTATGATTCTCACTTAGGGTGCAAAAGGtCCTGGGTTCAAATCCCAGAGGAGCCC Str: >>>>..>..>>>.........<<<..>..>.......<..<......>>>>>.......<<<<<<..<<<<. chr2.trna10 (156400769-156400840) Length: 72 bp Type: Ala Anticodon: CGC at 33-35 (156400801-156400803) Score: 74.4 HMM Sc=54.40 Sec struct Sc=20.00 * | * | * | * | * | * | * | Seq: GGGGATGTAGCTCAGTGGTAGAGCGCGCGCTTCGCATGTGTGAGGtCCCGGGTTCAATCCCCGGCATCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr2.trna12 (218245826-218245918) Length: 93 bp Type: Tyr Anticodon: ATA at 34-36 (218245859-218245861) Score: 57.6 Possible intron: 38-57 (218245863-218245882) HMM Sc=34.40 Sec struct Sc=23.20 * | * | * | * | * | * | * | * | * | Seq: CCTTCAATAGTTCAGCTGGTAGAGCAGAGGACTATAGctacttcctcagtaggagacGTCCTTAGGtTGCTGGTTCGATTCCAGCTTGAAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>...........................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr2.trna13 (218626417-218626484) Length: 68 bp Type: Ser Anticodon: TGA at 30-32 (218626446-218626448) Score: 26.3 Filtered, Possible pseudogene: HMM Sc=27.40 Sec struct Sc=-1.10 * | * | * | * | * | * | * Seq: GcaCAGCCCAGTGGTgcAGGGCATGGCTCTGACACCTGGCGgCCTGGGTTCAAATCCCAGCTTCTACA Str: >....>>>>.........<<<<.>>>.........<<<.....>>>>>.......<<<<<......<. chr2.trna14 (223321669-223321597) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (223321636-223321634) Score: 34.5 Filtered, Possible pseudogene: HMM Sc=41.00 Sec struct Sc=-6.50 * | * | * | * | * | * | * | Seq: GTTGGGGTAACTCAGTTGGTAGAGTAGCAGACTTTTCATCTGAGGGtCCAGGGTTTAAGTCCATGTCCAGGCA Str: >>>.>>>..>>>>........<<<<..>>>>.......<<<<......>>.>>.......<<.<<<<<.<<<. chr2.trna15 (203364478-203364406) Length: 73 bp Type: Glu Anticodon: TTC at 33-35 (203364446-203364444) Score: 36.1 Filtered, Possible pseudogene: HMM Sc=44.30 Sec struct Sc=-8.20 * | * | * | * | * | * | * | Seq: GCAATGGTGGTTCAGTGGTAGAATTCTCGCCTTTCACACAGGAGaCCCGGGTTCAATTCCTGaCCCAtgTACA Str: >.>.>>>..>>>>.......<<<<.>>.>.........<.<<.....>>>>.......<<<<..<<<..<.<. chr2.trna16 (158881731-158881659) Length: 73 bp Type: Glu Anticodon: CTC at 35-37 (158881697-158881695) Score: 21.4 Filtered, Possible pseudogene: HMM Sc=22.00 Sec struct Sc=-0.60 * | * | * | * | * | * | * | Seq: TCCcCTGGTGGTCTAGTGCTtAGGATTTGGCACTCTCGCCACCGCAgCCTGCGTTCAATTCCCGGTCAGGGAA Str: >>>.>>>>..>>>>........<<<<.>>>...........<<<....>>>.>.......<.<<<<<<<<<<. chr2.trna17 (156401217-156401147) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (156401185-156401183) Score: 81.0 HMM Sc=59.90 Sec struct Sc=21.10 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr2.trna18 (151831205-151831138) Length: 68 bp Type: Leu Anticodon: CAA at 50-52 (151831156-151831154) Score: 22.0 Filtered: HMM Sc=15.20 Sec struct Sc=6.80 * | * | * | * | * | * | * Seq: TGCAGATTAGCACAGTGGTttgAGTGTgGATCTAACCTTTGTCTGGGTTCAAAGCCCAGATCcaGCAA Str: >>>.>>>..>>>>..........<<<<...............>>>>>.......<<<<<<<<..<<<. chr2.trna19 (130337199-130337128) Length: 72 bp Type: Glu Anticodon: TTC at 34-36 (130337166-130337164) Score: 72.5 HMM Sc=47.50 Sec struct Sc=25.00 * | * | * | * | * | * | * | Seq: TCCCATATGGTCTAGCGGTtAGGATTCCTGGTTTTCACCCAGGTGGCCCGGGTTCGACTCCCGGTATGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr2.trna22 (70249061-70248991) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (70249029-70249027) Score: 75.1 HMM Sc=46.00 Sec struct Sc=29.10 * | * | * | * | * | * | * | Seq: GCGCCGCTGGTGTAGTGGTATCATGCAAGATTCCCATTCTTGCGaCCCGGGTTCGATTCCCGGGCGGCGCA Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr2.trna23 (45710374-45710302) Length: 73 bp Type: Gln Anticodon: TTG at 34-36 (45710341-45710339) Score: 38.0 Filtered, Possible pseudogene: HMM Sc=37.80 Sec struct Sc=0.20 * | * | * | * | * | * | * | Seq: GGCTGTGTACCTCAGTGGGcAAGGGTATGGACTTTGAAGCCAGACTaTTTGGGTTCAAATCCCAGCTTGGCCT Str: >>>>>.>..>>>..........<<<..>>>.........<<<......>>>>>.......<<<<<<.<<<<<. chr20.trna1 (17874498-17874575) Length: 78 bp Type: Undet Anticodon: NNN at 0-0 (0-0) Score: 29.9 Filtered, Possible pseudogene: HMM Sc=34.50 Sec struct Sc=-4.60 * | * | * | * | * | * | * | * Seq: GGCAGTGTAGCCCAGAGGTtcaAGGGCATTCGCTCTGGTaTCAGAAGGgTCTGGGTTCAAATCCCTtgtGCACTGCTT Str: >>>>>>>..>>>>..........<<<<.>>.>.........<.<<.....>.>>>.......<<<....<<<<<<<<. chr20.trna2 (50335886-50335805) Length: 82 bp Type: Leu Anticodon: AAG at 35-37 (50335852-50335850) Score: 45.4 Filtered, Possible pseudogene: HMM Sc=41.50 Sec struct Sc=3.90 * | * | * | * | * | * | * | * | Seq: GGTAGGGTGGCCGAGCGGTctAAGGCACTGTATTAAGACTCCAGTCTCTTCAGAGGCATGGGTTTGAATCCCACTGCTGCCA Str: >>>>>.>..>>>...........<<<.>>>.>.......<.<<<.>>>>..<<<<...>>>>.......<<<<.<.<<<<<. chr21.trna1 (17454859-17454789) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (17454827-17454825) Score: 80.9 HMM Sc=60.10 Sec struct Sc=20.80 * | * | * | * | * | * | * | Seq: GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCCATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr22.trna1 (44150657-44150740) Length: 84 bp Type: SeC Anticodon: TCA at 36-38 (44150692-44150694) Score: 111.5 Filtered: HMM Sc=0.00 Sec struct Sc=0.00 * | * | * | * | * | * | * | * | Seq: GCTCGGATGATCCTCAGTGGTCTGGGGTGCAGGCTTCAAACCTGTAGCTGTCTAGTGACAGAGTGGTTCAATTCCACCTTTGTA Str: >>...>>.>..>>>>>>....<<<<<<>>>>>>.......<<<<<<.>>>>>....<<<<<.>>>>.......<<<<<.<<<<. chr22.trna2 (30308247-30308169) Length: 79 bp Type: Undet Anticodon: NNN at 0-0 (0-0) Score: 22.3 Filtered, Possible pseudogene: HMM Sc=21.40 Sec struct Sc=0.90 * | * | * | * | * | * | * | * Seq: GGCAGAGaagtgTAGTACAAGGGTcaagAGCATGAGCTGtagagtCAGTCAGgCCTGGGTTTGAGTCCCAGCTCTGCCA Str: >>>>>>>.......>>.>...........<.<<.....................>>>>>.......<<<<<<<<<<<<. chr3.trna1 (15211466-15211541) Length: 76 bp Type: Lys Anticodon: TTT at 37-39 (15211502-15211504) Score: 41.4 Filtered: HMM Sc=30.50 Sec struct Sc=10.90 * | * | * | * | * | * | * | * Seq: GCCTGGATAGCTCCTTCGGTAGAGCatcATCAGACTTTTAATGTGAGGGtCCAGGGTTCAAGTTCCTGTTTGGGCG Str: >>>>>>>..>>>>........<<<<....>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<<<<. chr3.trna2 (124141872-124141944) Length: 73 bp Type: Pro Anticodon: GGG at 35-37 (124141906-124141908) Score: 20.7 Filtered, Possible pseudogene: HMM Sc=19.20 Sec struct Sc=1.50 * | * | * | * | * | * | * | Seq: AGCAGTGTGGGCCAGTGGGaAGTGCTCAGgCTTTGGGGCTGgGAGGaTCTGGGTTTGAATCCCAGCTCTGCTG Str: >>>>>.>..>..>........<..<.>...>.........<.<.....>>>>>.......<<<<<<.<<<<<. chr3.trna3 (169772230-169772302) Length: 73 bp Type: Val Anticodon: AAC at 34-36 (169772263-169772265) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTAACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr3.trna4 (184648377-184648307) Length: 71 bp Type: Asp Anticodon: GTC at 34-36 (184648344-184648342) Score: 38.2 Filtered: HMM Sc=16.30 Sec struct Sc=21.90 * | * | * | * | * | * | * | Seq: TTCTTGTTAATATAGTGGTgAGTATTCCCACCTGTCATGCGGGAGACGGGGTTCAATTCCCTGATGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<...>>>>>.......<<<<<<<<<<<<. chr3.trna5 (148503522-148503441) Length: 82 bp Type: Leu Anticodon: AAG at 35-37 (148503488-148503486) Score: 27.5 Filtered: HMM Sc=15.20 Sec struct Sc=12.30 * | * | * | * | * | * | * | * | Seq: GGTAGCATGGCTGAGTGGTcTAAGaTTCTGAATTAAGTCTCCAGTCTCTTTGGGGgCGTGGTtTTCAATCCCACCGCTGCTA Str: >>>>>>...>>>..........<<.<.>>>.>.......<.<<<.>>>...<<<...>>>>.........<<<<.<<<<<<. chr3.trna6 (132231869-132231798) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (132231837-132231835) Score: 77.2 HMM Sc=56.90 Sec struct Sc=20.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCTGGTTCAAATCCAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr3.trna7 (132229171-132229100) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (132229139-132229137) Score: 79.3 HMM Sc=62.00 Sec struct Sc=17.30 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCTGGTTCAAATCCAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr3.trna8 (111349730-111349656) Length: 75 bp Type: Undet Anticodon: NNN at 0-0 (0-0) Score: 26.7 Filtered, Possible pseudogene: HMM Sc=24.30 Sec struct Sc=2.40 * | * | * | * | * | * | * | Seq: CCCaaTGcTGTAGCTCAGCAGCtAGGGCTTTGTCTTTTCAAAATGGCAGCCTGGGTTCAATTCCCAGCTTAGGGA Str: >>>..>>..>..>>>>........<<<<.>>..........<<.......>>>>>.......<<<<<<.<<<<<. chr3.trna10 (45689071-45688999) Length: 73 bp Type: Arg Anticodon: ACG at 34-36 (45689038-45689036) Score: 64.2 HMM Sc=45.60 Sec struct Sc=18.60 * | * | * | * | * | * | * | Seq: GGGCCAGTGGCGCAATGGAtAACGCGTCTGACTACGGATCAGAAGAtTCTAGGTTCGACTCCTGGCTGGCTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr3.trna11 (17699972-17699893) Length: 80 bp Type: Cys Anticodon: GCA at 34-36 (17699939-17699937) Score: 40.9 Filtered, Possible pseudogene: HMM Sc=38.60 Sec struct Sc=2.30 * | * | * | * | * | * | * | * Seq: GGGGGTATATCTCAGGGGGcAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTGAAATCCGGGtgctggaTTTTCTCA Str: >>>>>.>...>>>........<<<..>>>>>.......<<<<<.....>>>>>.......<<<<<.......<.<<<<<. chr4.trna1 (123508921-123508850) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (123508889-123508887) Score: 81.9 HMM Sc=61.60 Sec struct Sc=20.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCAAATCCGGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr4.trna2 (40906798-40906726) Length: 73 bp Type: Gln Anticodon: TTG at 34-36 (40906765-40906763) Score: 31.7 Filtered, Possible pseudogene: HMM Sc=26.80 Sec struct Sc=4.90 * | * | * | * | * | * | * | Seq: GACCATGTGGCCTAAGGGAaAAGACATCTCACTTTGGGTCAGAAGAtTGAGGGTTCAAGTCCTTTCATGGTCA Str: >>>>>>>..>.>>........<<.<.>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna1 (152609036-152609211) Length: 176 bp Type: Cys Anticodon: ACA at 33-35 (152609068-152609070) Score: 35.9 Possible intron: 37-133 (152609072-152609168) Filtered, Possible pseudogene: HMM Sc=40.00 Sec struct Sc=-4.10 * | * | * | * | * | * | * | * | * | * | * | * | * | * | * | * | * | * Seq: GGCTGTATAGCTCAGTGGTAGAGCATTTGACTACAGaatcctatactcaggggaaggagaactgggggtttctcagtgggtcaaaggacttgtagtggtaaatcaaaagcaactctataagctatgtaacaaaCTTTAAAGtCATatgtagctGGGTTCAAATCCTGTTTCTGCCA Str: >>>.>.>..>>>>.......<<<<.>>.>>........................................................................................................<<.<<....>>........>>>.......<<<<<<.<.<<<. chr5.trna2 (181097070-181097142) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (181097103-181097105) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTCACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna3 (181101840-181101921) Length: 82 bp Type: Leu Anticodon: AAG at 35-37 (181101874-181101876) Score: 75.2 HMM Sc=53.50 Sec struct Sc=21.70 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGCGGTctAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGAGGCGTGGGTTCGAATCCCACCGCTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<. chr5.trna4 (181164154-181164226) Length: 73 bp Type: Val Anticodon: AAC at 34-36 (181164187-181164189) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTAACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna5 (181169610-181169682) Length: 73 bp Type: Val Anticodon: AAC at 34-36 (181169643-181169645) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTAACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna6 (181173650-181173722) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (181173683-181173685) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTCACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna7 (181187701-181187782) Length: 82 bp Type: Leu Anticodon: AAG at 35-37 (181187735-181187737) Score: 74.8 HMM Sc=55.10 Sec struct Sc=19.70 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGCGGTctAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGgCGTGGGTTCGAATCCCACCGCTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<. chr5.trna8 (181206868-181206939) Length: 72 bp Type: Ala Anticodon: TGC at 33-35 (181206900-181206902) Score: 79.7 HMM Sc=55.30 Sec struct Sc=24.40 * | * | * | * | * | * | * | Seq: GGGGATGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGTATGAGGcCCCGGGTTCGATCCCCGGCATCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna9 (181207755-181207827) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (181207788-181207790) Score: 87.8 HMM Sc=68.80 Sec struct Sc=19.00 * | * | * | * | * | * | * | Seq: GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGtCGTGGGTTCGAGCCCCACGTTGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna10 (181222467-181222395) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (181222434-181222432) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTCACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna11 (181222051-181221979) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (181222018-181222016) Score: 87.8 HMM Sc=68.80 Sec struct Sc=19.00 * | * | * | * | * | * | * | Seq: GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGtCGTGGGTTCGAGCCCCACGTTGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna12 (181218342-181218270) Length: 73 bp Type: Val Anticodon: AAC at 34-36 (181218309-181218307) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTAACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna13 (181191758-181191687) Length: 72 bp Type: Thr Anticodon: TGT at 34-36 (181191725-181191723) Score: 75.7 HMM Sc=50.60 Sec struct Sc=25.10 * | * | * | * | * | * | * | Seq: GGCTCCATAGCTCAGGGGTtAGAGCACTGGTCTTGTAAACCAGGGtCGCGAGTTCAAATCTCGCTGGGGCCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr5.trna14 (181188925-181188854) Length: 72 bp Type: Pro Anticodon: TGG at 33-35 (181188893-181188891) Score: 70.3 HMM Sc=43.90 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna15 (181188488-181188416) Length: 73 bp Type: Val Anticodon: AAC at 34-36 (181188455-181188453) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTcATCACGTTCGCCTAACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna16 (181174125-181174044) Length: 82 bp Type: Leu Anticodon: AAG at 35-37 (181174091-181174089) Score: 75.2 HMM Sc=53.50 Sec struct Sc=21.70 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGCGGTctAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGAGGCGTGGGTTCGAATCCCACCGCTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<. chr5.trna17 (181164645-181164561) Length: 85 bp Type: Leu Anticodon: AAG at 35-37 (181164611-181164609) Score: 24.1 Possible intron: 39-47 (181164607-181164599) Filtered, Possible pseudogene: HMM Sc=30.40 Sec struct Sc=-6.30 * | * | * | * | * | * | * | * | Seq: GATAGCAAGGCCGAGCGGTctAAGGCTCCGGATTAAGGcgccggtgtCTTCGGAGGCATGGGTTCGAATTCCACctcTGCCAACT Str: >.>.>>>..>>>...........<<<.>>>>>................<<<<<.....>>>>.......<<<<....<<<.<.<. chr5.trna18 (181102325-181102253) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (181102292-181102290) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTCACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr5.trna19 (181097555-181097474) Length: 82 bp Type: Leu Anticodon: AAG at 35-37 (181097521-181097519) Score: 75.2 HMM Sc=53.50 Sec struct Sc=21.70 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGCGGTctAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGAGGCGTGGGTTCGAATCCCACCGCTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<. chr5.trna20 (168389710-168389639) Length: 72 bp Type: Lys Anticodon: CTT at 34-36 (168389677-168389675) Score: 29.9 Filtered: HMM Sc=23.30 Sec struct Sc=6.60 * | * | * | * | * | * | * | Seq: GCCCAACTGGTTCAGTCGGTAGAGAATGAGACTCTTAATCTCAGGtCATAGATTCATGTCACATGTTGGGTG Str: >>>>>>>...>>>........<<<..>>>>>.......<<<<<....>>.............<<<<<<<<<. chr5.trna21 (151868584-151868513) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (151868551-151868549) Score: 22.8 Filtered, Possible pseudogene: HMM Sc=29.30 Sec struct Sc=-6.50 * | * | * | * | * | * | * | Seq: GGTAGTGTAGTCTACTGGTTAAACGCtTGGGCTCTGACATTAACGtCCTGGGTTCAAATCCCAGCTTTGTCA Str: >>>>>.>..>>.>.......<.<<...>>>.........<<<.....>>>>>.......<<<<<<.<<<<<. chr5.trna22 (142394494-142394423) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (142394461-142394459) Score: 40.3 Filtered: HMM Sc=19.00 Sec struct Sc=21.30 * | * | * | * | * | * | * | Seq: TCCTCATCAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCTGGGGTTCGATTCCCTGAGGAGGAG Str: >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<.<<<<<. chr5.trna23 (26198502-26198430) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (26198469-26198467) Score: 58.2 HMM Sc=47.60 Sec struct Sc=10.60 * | * | * | * | * | * | * | Seq: GCCCGACTACCTCAGTCGGTGGAGCATGGGACTCTTCATCCCAGGGtTGTGGGTTCGAGCCCCACATTGGGCA Str: >>>>>>....>>>........<<<..>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<<<. chr6.trna1 (18836171-18836242) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (18836204-18836206) Score: 71.5 HMM Sc=44.00 Sec struct Sc=27.50 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTtAGCACTCTGGACTCTGAATCCAGCGaTCCGAGTTCAAATCTCGGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna2 (26286526-26286597) Length: 72 bp Type: iMet Anticodon: CAT at 33-35 (26286558-26286560) Score: 60.4 HMM Sc=30.80 Sec struct Sc=29.60 * | * | * | * | * | * | * | Seq: AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGtCGATGGATCGAAACCATCCTCTGCTA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna3 (26299677-26299749) Length: 73 bp Type: Arg Anticodon: TCG at 34-36 (26299710-26299712) Score: 66.8 HMM Sc=46.00 Sec struct Sc=20.80 * | * | * | * | * | * | * | Seq: GACCACGTGGCCTAATGGAtAAGGCGTCTGACTTCGGATCAGAAGAtTGAGGGTTCGAATCCCTTCGTGGTTA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna4 (26322818-26322890) Length: 73 bp Type: Arg Anticodon: TCG at 34-36 (26322851-26322853) Score: 70.3 HMM Sc=47.80 Sec struct Sc=22.50 * | * | * | * | * | * | * | Seq: GACCACGTGGCCTAATGGAtAAGGCGTCTGACTTCGGATCAGAAGAtTGAGGGTTCGAATCCCTCCGTGGTTA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna5 (26327589-26327670) Length: 82 bp Type: Ser Anticodon: AGA at 34-36 (26327622-26327624) Score: 89.6 HMM Sc=56.90 Sec struct Sc=32.70 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACTACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna6 (26328140-26328212) Length: 73 bp Type: Arg Anticodon: ACG at 34-36 (26328173-26328175) Score: 67.6 HMM Sc=45.90 Sec struct Sc=21.70 * | * | * | * | * | * | * | Seq: GGGCCAGTGGCGCAATGGAtAACGCGTCTGACTACGGATCAGAAGAtTCCAGGTTCGACTCCTGGCTGGCTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna7 (26521208-26521290) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (26521242-26521244) Score: 78.2 HMM Sc=47.50 Sec struct Sc=30.70 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGCGGTctAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTCCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna8 (26537498-26537570) Length: 73 bp Type: Arg Anticodon: ACG at 34-36 (26537531-26537533) Score: 67.6 HMM Sc=45.90 Sec struct Sc=21.70 * | * | * | * | * | * | * | Seq: GGGCCAGTGGCGCAATGGAtAACGCGTCTGACTACGGATCAGAAGAtTCCAGGTTCGACTCCTGGCTGGCTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna9 (26538054-26538126) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (26538087-26538089) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTCACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna10 (26553503-26553574) Length: 72 bp Type: Ala Anticodon: CGC at 33-35 (26553535-26553537) Score: 79.7 HMM Sc=55.30 Sec struct Sc=24.40 * | * | * | * | * | * | * | Seq: GGGGATGTAGCTCAGTGGTAGAGCGCATGCTTCGCATGTATGAGGtCCCGGGTTCGATCCCCGGCATCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna11 (26554122-26554195) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (26554156-26554158) Score: 81.2 HMM Sc=64.80 Sec struct Sc=16.40 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACGGGCCA Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr6.trna12 (26555270-26555341) Length: 72 bp Type: Pro Anticodon: AGG at 33-35 (26555302-26555304) Score: 70.2 HMM Sc=43.80 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna13 (26556546-26556618) Length: 73 bp Type: Lys Anticodon: CTT at 34-36 (26556579-26556581) Score: 87.8 HMM Sc=68.80 Sec struct Sc=19.00 * | * | * | * | * | * | * | Seq: GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGtCGTGGGTTCGAGCCCCACGTTGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna14 (26568858-26568948) Length: 91 bp Type: Tyr Anticodon: GTA at 34-36 (26568891-26568893) Score: 77.9 Possible intron: 38-55 (26568895-26568912) HMM Sc=50.00 Sec struct Sc=27.90 * | * | * | * | * | * | * | * | * | Seq: CCTTCGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGttggctgtgtccttagacATCCTTAGGtCGCTGGTTCGAATCCGGCTCGAAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>.........................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna15 (26575570-26575659) Length: 90 bp Type: Tyr Anticodon: GTA at 34-36 (26575603-26575605) Score: 72.4 Possible intron: 38-54 (26575607-26575623) HMM Sc=48.20 Sec struct Sc=24.20 * | * | * | * | * | * | * | * | * Seq: CTTTCGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGgttcattaaactaaggcATCCTTAGGtCGCTGGTTCGAATCCGGCTCGAAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>........................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna16 (26577104-26577192) Length: 89 bp Type: Tyr Anticodon: GTA at 34-36 (26577137-26577139) Score: 77.5 Possible intron: 38-53 (26577141-26577156) HMM Sc=51.40 Sec struct Sc=26.10 * | * | * | * | * | * | * | * | * Seq: CCTTCGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGgctcattaagcaaggtATCCTTAGGtCGCTGGTTCGAATCCGGCTCGGAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>.......................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna17 (26594874-26594962) Length: 89 bp Type: Tyr Anticodon: GTA at 34-36 (26594907-26594909) Score: 75.1 Possible intron: 38-53 (26594911-26594926) HMM Sc=48.90 Sec struct Sc=26.20 * | * | * | * | * | * | * | * | * Seq: CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGgggtttgaatgtggtcATCCTTAGGtCGCTGGTTCGAATCCGGCTCGGAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>.......................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna18 (26673362-26673434) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26673395-26673397) Score: 58.9 HMM Sc=34.90 Sec struct Sc=24.00 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGTGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGTGGGATCAATGCCCACATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna19 (26682487-26682559) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26682520-26682522) Score: 60.0 HMM Sc=36.00 Sec struct Sc=24.00 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGTGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGTGGGATCGATGCCCACATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna20 (26687257-26687329) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26687290-26687292) Score: 60.1 HMM Sc=36.10 Sec struct Sc=24.00 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGTGGTAGAGCGCTTGCTTAGCACGCAAGAGGtAGTGGGATCGATGCCCACATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna21 (26701483-26701555) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (26701516-26701518) Score: 79.2 HMM Sc=55.30 Sec struct Sc=23.90 * | * | * | * | * | * | * | Seq: GCCCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCATAATCTGAAGGtCCTGAGTTCAAGCCTCAGAGAGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna22 (26705377-26705449) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26705410-26705412) Score: 58.7 HMM Sc=34.60 Sec struct Sc=24.10 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGCGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGTGGGATCGATGCCCACATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna23 (26713669-26713741) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26713702-26713704) Score: 24.8 Filtered: HMM Sc=14.00 Sec struct Sc=10.80 * | * | * | * | * | * | * | Seq: GAAGAAGTAGCTCAAGTGGTGGAGTGCTCGCTTAGCATGTGAGAGGtAGTGGGATTGATGCCCACATTCTCCA Str: >.>>>>...>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<.<. chr6.trna24 (26728053-26728125) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26728086-26728088) Score: 47.3 Filtered: HMM Sc=29.20 Sec struct Sc=18.10 * | * | * | * | * | * | * | Seq: GGGGAATTGGCTCAAGCGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGCAGGATCGACGCCTGCACTCTCCA Str: >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. chr6.trna25 (26730534-26730606) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26730567-26730569) Score: 58.3 HMM Sc=34.20 Sec struct Sc=24.10 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAGGCGGTAGAGCGCTCGCTTAGCATGCGAGAGGtAGCGGGATCGACGCCCGCATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna26 (26743263-26743335) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (26743296-26743298) Score: 80.2 HMM Sc=56.30 Sec struct Sc=23.90 * | * | * | * | * | * | * | Seq: GCCCTCTTAGCGCAGCGGGcAGCGCGTCAGTCTCATAATCTGAAGGtCCTGAGTTCGAGCCTCAGAGAGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna27 (26756552-26756625) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (26756586-26756588) Score: 81.6 HMM Sc=63.70 Sec struct Sc=17.90 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCTAAGGtCGCGGGTTCGATCCCCGTACTGGCCA Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna28 (26766234-26766306) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (26766267-26766269) Score: 80.2 HMM Sc=56.30 Sec struct Sc=23.90 * | * | * | * | * | * | * | Seq: GCCCTCTTAGCGCAGCGGGcAGCGCGTCAGTCTCATAATCTGAAGGtCCTGAGTTCGAGCCTCAGAGAGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna29 (26780622-26780695) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (26780656-26780658) Score: 81.2 HMM Sc=64.80 Sec struct Sc=16.40 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTcAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACGGGCCA Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr6.trna30 (27020346-27020439) Length: 94 bp Type: Ile Anticodon: TAT at 35-37 (27020380-27020382) Score: 73.1 Possible intron: 39-58 (27020384-27020403) HMM Sc=45.00 Sec struct Sc=28.10 * | * | * | * | * | * | * | * | * | Seq: GCTCCAGTGGCGCAATCGGTtAGCGCGCGGTACTTATAtggcagtatgtgtgcgagtgATGCCGAGGtTGTGAGTTCGAGCCTCACCTGGAGCA Str: >>>>>>>..>>>>.........<<<<.>>>>>...........................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna31 (27091742-27091813) Length: 72 bp Type: Pro Anticodon: CGG at 33-35 (27091774-27091776) Score: 65.9 HMM Sc=39.70 Sec struct Sc=26.20 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTCGGGTGTGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna32 (27097306-27097387) Length: 82 bp Type: Ser Anticodon: GCT at 34-36 (27097339-27097341) Score: 91.9 HMM Sc=63.40 Sec struct Sc=28.50 * | * | * | * | * | * | * | * | Seq: GACGAGGTGGCCGAGTGGTtAAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCACCCTCGTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna33 (27150243-27150315) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (27150276-27150278) Score: 43.8 Filtered: HMM Sc=34.10 Sec struct Sc=9.70 * | * | * | * | * | * | * | Seq: GTTTCTGTAGTATGGTGGTtATCACGTTAGTCTCACACGTGAAAGGtCCCTGGTTCGAAACCAGGTGGAAACA Str: >>>>>>>..>>............<<.>>.>>.......<<.<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna34 (27158127-27158198) Length: 72 bp Type: His Anticodon: GTG at 34-36 (27158160-27158162) Score: 60.1 HMM Sc=29.80 Sec struct Sc=30.30 * | * | * | * | * | * | * | Seq: GCCGTGATCGTATAGTGGTtAGTACTCTGCGTTGTGGCCGCAGCAaCCTCGGTTCGAATCCGAGTCACGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna35 (27162271-27162344) Length: 74 bp Type: Thr Anticodon: AGT at 35-37 (27162305-27162307) Score: 80.6 HMM Sc=60.60 Sec struct Sc=20.00 * | * | * | * | * | * | * | Seq: GGCCCTGTGGCTTAGCTGGTcAAAGCGCCTGTCTAGTAAACAGGAGAtCCTGGGTTCGAATCCCAGCGGGGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna36 (27209849-27209930) Length: 82 bp Type: Ser Anticodon: CGA at 34-36 (27209882-27209884) Score: 94.0 HMM Sc=65.10 Sec struct Sc=28.90 * | * | * | * | * | * | * | * | Seq: GCTGTGATGGCCGAGTGGTtAAGGCGTTGGACTCGAAATCCAATGGGGTCTCCCCGCGCAGGTTCAAATCCTGCTCACAGCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna37 (27215173-27215245) Length: 73 bp Type: Arg Anticodon: ACG at 34-36 (27215206-27215208) Score: 64.2 HMM Sc=45.60 Sec struct Sc=18.60 * | * | * | * | * | * | * | Seq: GGGCCAGTGGCGCAATGGAtAACGCGTCTGACTACGGATCAGAAGAtTCTAGGTTCGACTCCTGGCTGGCTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna38 (27235509-27235581) Length: 73 bp Type: Val Anticodon: AAC at 34-36 (27235542-27235544) Score: 67.0 HMM Sc=48.80 Sec struct Sc=18.20 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTTGCCTAACACGCGAAAGGtCCCCGGTTCGAAACCGGGCAGAAACA Str: >>>>>.>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. chr6.trna39 (27260931-27261005) Length: 75 bp Type: Ile Anticodon: AAT at 35-37 (27260965-27260967) Score: 32.4 Filtered: HMM Sc=24.60 Sec struct Sc=7.80 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCGGTTGCTtAGAGTGTTGTGTTAATTACGCtAAAGGtCGTGGGTTTGATCCTCTTACCGGCCA Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<.<<.....>.>>>.......<<<.<<<<<<<<. chr6.trna40 (27273960-27274033) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (27273994-27273996) Score: 79.3 HMM Sc=61.60 Sec struct Sc=17.70 * | * | * | * | * | * | * | Seq: GGCTGGTTAGTTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGTGGGTTCGATCCCCATATCGGCCA Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna41 (27284085-27284158) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (27284119-27284121) Score: 38.6 Filtered, Possible pseudogene: HMM Sc=41.90 Sec struct Sc=-3.30 * | * | * | * | * | * | * | Seq: GGCCGGTTAACTTAATTGGTtAGAGCGTGGTGCTAATAATGTCAAGGtTGCGGGTTGGATCCCCGAACGGGCCA Str: >>>>.>>...>>>.........<<<..>>>>>.......<<<<<......>>>>.......<<<<.<<.<<<<. chr6.trna42 (27290626-27290698) Length: 73 bp Type: Val Anticodon: TAC at 34-36 (27290659-27290661) Score: 68.7 HMM Sc=38.20 Sec struct Sc=30.50 * | * | * | * | * | * | * | Seq: GTTTCCGTGGTGTAGTGGTtATCACATTCGCCTTACACGCGAAAGGtCCTCGGGTCGAAACCGAGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna43 (27293892-27293965) Length: 74 bp Type: Ser Anticodon: ACT at 35-37 (27293926-27293928) Score: 47.0 Filtered, Possible pseudogene: HMM Sc=50.30 Sec struct Sc=-3.30 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTtAGAGCGTGCTGCTACTAATGCCAGGGtCGAGGTTTCGATCCCCGTACGGGCCT Str: >>>>.>>..>>>>.........<<<<.>>.>>.......<<.<<.....>.>>.........<<.<<<.<<<<. chr6.trna44 (27295433-27295504) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (27295466-27295468) Score: 66.2 HMM Sc=41.90 Sec struct Sc=24.30 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTtAGCACTCTGGACTCTGAATCCGGTAaTCCGAGTTCAAATCTCGGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna45 (27297996-27298077) Length: 82 bp Type: Ser Anticodon: GCT at 34-36 (27298029-27298031) Score: 91.0 HMM Sc=63.40 Sec struct Sc=27.60 * | * | * | * | * | * | * | * | Seq: GACGAGGTGGCCGAGTGGTtAAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCACCTTCGTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna46 (27478812-27478893) Length: 82 bp Type: Ser Anticodon: AGA at 34-36 (27478845-27478847) Score: 89.6 HMM Sc=56.90 Sec struct Sc=32.70 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACTACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna47 (27479674-27479745) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (27479707-27479709) Score: 66.5 HMM Sc=35.70 Sec struct Sc=30.80 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna48 (27495814-27495895) Length: 82 bp Type: Ser Anticodon: AGA at 34-36 (27495847-27495849) Score: 89.6 HMM Sc=56.90 Sec struct Sc=32.70 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACTACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna49 (27503039-27503120) Length: 82 bp Type: Ser Anticodon: AGA at 34-36 (27503072-27503074) Score: 89.6 HMM Sc=56.90 Sec struct Sc=32.70 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACTACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna50 (27503744-27503815) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (27503777-27503779) Score: 66.5 HMM Sc=35.70 Sec struct Sc=30.80 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTATCCCCGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna51 (27519529-27519600) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (27519562-27519564) Score: 71.5 HMM Sc=44.00 Sec struct Sc=27.50 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTtAGCACTCTGGACTCTGAATCCAGCGaTCCGAGTTCAAATCTCGGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna52 (27532208-27532289) Length: 82 bp Type: Ser Anticodon: AGA at 34-36 (27532241-27532243) Score: 87.2 HMM Sc=54.30 Sec struct Sc=32.90 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGCGATGGACTAGAAATCCATTGGGGTTTCCCCACGCAGGTTCGAATCCTGCCGACTACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna53 (27545689-27545770) Length: 82 bp Type: Ser Anticodon: TGA at 34-36 (27545722-27545724) Score: 90.4 HMM Sc=57.50 Sec struct Sc=32.90 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGCGATGGACTTGAAATCCATTGGGGTTTCCCCGCGCAGGTTCGAATCCTGCCGACTACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna54 (27562184-27562270) Length: 87 bp Type: Arg Anticodon: TCT at 34-36 (27562217-27562219) Score: 61.4 Possible intron: 38-51 (27562221-27562234) HMM Sc=48.20 Sec struct Sc=13.20 * | * | * | * | * | * | * | * | * Seq: GGCTCTGTGGCGCAATGGAtAGCGCATTGGACTTCTAgcctaaatcaagagATTCAAAGGtTGCGGGTTCGAGTCCCTCCAGAGTCG Str: >>>>>>>..>>>>........<<<<.>>>>>.....................<<<<<.....>.>>>.......<<<.<<<<<<<<. chr6.trna55 (27576067-27576139) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (27576100-27576102) Score: 61.2 Filtered: HMM Sc=51.60 Sec struct Sc=9.60 * | * | * | * | * | * | * | Seq: ACCTGGGTAGCTCAGTAGGTAGAACATCAGACTTTTAATCTGAGGGtCTAGGGTTCAAGTCCCTGTCCAGGCG Str: .>>>>>>..>.>>........<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.. chr6.trna56 (27618356-27618429) Length: 74 bp Type: Thr Anticodon: CGT at 34-36 (27618389-27618391) Score: 66.2 HMM Sc=45.50 Sec struct Sc=20.70 * | * | * | * | * | * | * | Seq: GGCCCTGTAGCTCAGCGGTtGGAGCGCTGGTCTCGTAAACCtAGGGGtCGTGAGTTCAAATCTCACCAGGGCCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<.<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna57 (27631421-27631514) Length: 94 bp Type: Ile Anticodon: TAT at 35-37 (27631455-27631457) Score: 73.1 Possible intron: 39-58 (27631459-27631478) HMM Sc=45.00 Sec struct Sc=28.10 * | * | * | * | * | * | * | * | * | Seq: GCTCCAGTGGCGCAATCGGTtAGCGCGCGGTACTTATAcaacagtatatgtgcgggtgATGCCGAGGtTGTGAGTTCGAGCCTCACCTGGAGCA Str: >>>>>>>..>>>>.........<<<<.>>>>>...........................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna58 (27664766-27664841) Length: 76 bp Type: Phe Anticodon: GAA at 34-36 (27664799-27664801) Score: 50.0 Possible intron: 38-40 (27664803-27664805) Filtered, Possible pseudogene: HMM Sc=46.50 Sec struct Sc=3.50 * | * | * | * | * | * | * | * Seq: GCCGAAATAGCTCAATTGGGAGAGTGTTAGACTGAAGatcTTCTGCAGGtCTCTGGTTCAATTCCGGGTTTCGACA Str: >.>>>>>..>>>>........<<<<..>>>>..........<<<<......>>>>>.......<<<<<<<<<<.<. chr6.trna59 (27668583-27668656) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (27668617-27668619) Score: 75.8 HMM Sc=59.40 Sec struct Sc=16.40 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTCGGCtAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACGGGCCA Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr6.trna60 (27688188-27688261) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (27688222-27688224) Score: 86.3 HMM Sc=64.40 Sec struct Sc=21.90 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACTGGCCA Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna61 (27726694-27726767) Length: 74 bp Type: Thr Anticodon: AGT at 35-37 (27726728-27726730) Score: 81.2 HMM Sc=60.00 Sec struct Sc=21.20 * | * | * | * | * | * | * | Seq: GGCTTCGTGGCTTAGCTGGTtAAAGCGCCTGTCTAGTAAACAGGAGAtCCTGGGTTCGAATCCCAGCGAGGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna62 (27777885-27777956) Length: 72 bp Type: iMet Anticodon: CAT at 33-35 (27777917-27777919) Score: 51.7 HMM Sc=22.20 Sec struct Sc=29.50 * | * | * | * | * | * | * | Seq: AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGtCGATGGATCTAAACCATCCTCTGCTA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna63 (28213037-28213118) Length: 82 bp Type: Ser Anticodon: GCT at 34-36 (28213070-28213072) Score: 85.2 HMM Sc=58.30 Sec struct Sc=26.90 * | * | * | * | * | * | * | * | Seq: GACGAGGTGGCCGAGTGGTtAAGGCGATGGACTGCTAATCCATTGTGCTCTGCACACGTGGGTTCGAATCCCATCCTCGTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna64 (28480726-28480798) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (28480759-28480761) Score: 24.1 Filtered, Possible pseudogene: HMM Sc=26.70 Sec struct Sc=-2.60 * | * | * | * | * | * | * | Seq: GCCTTCTTAGCCCtgGAGGCAGCACATCAGTCTCATAATCTGAAGGtCCCGAGCTTGAACCTCAGAGAGGGCA Str: >>>>>>>..>..>........<..<.>>>>.........<<<<.....>.>>>.......<<<.<<<<<<<<. chr6.trna65 (28537590-28537683) Length: 94 bp Type: Ile Anticodon: TAT at 35-37 (28537624-28537626) Score: 72.1 Possible intron: 39-58 (28537628-28537647) HMM Sc=44.00 Sec struct Sc=28.10 * | * | * | * | * | * | * | * | * | Seq: GCTCCAGTGGCGCAATCGGTtAGCGCGCGGTACTTATAagacagtgcacctgtgagcaATGCCGAGGtTGTGAGTTCAAGCCTCACCTGGAGCA Str: >>>>>>>..>>>>.........<<<<.>>>>>...........................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna66 (28589379-28589450) Length: 72 bp Type: Gln Anticodon: TTG at 34-36 (28589412-28589414) Score: 70.0 HMM Sc=42.80 Sec struct Sc=27.20 * | * | * | * | * | * | * | Seq: GGTCCCATGGTGTAATGGTtAGCACTCTGGACTTTGAATCCAGCAaTCCGAGTTCGAATCTCGGTGGGACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna67 (28607156-28607227) Length: 72 bp Type: Ala Anticodon: AGC at 33-35 (28607188-28607190) Score: 80.3 HMM Sc=57.00 Sec struct Sc=23.30 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGTACGAGGtCCCGGGTTCAATCCCCGGCACCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna68 (28643445-28643516) Length: 72 bp Type: Ala Anticodon: TGC at 33-35 (28643477-28643479) Score: 79.7 HMM Sc=55.30 Sec struct Sc=24.40 * | * | * | * | * | * | * | Seq: GGGGATGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGTATGAGGtCCCGGGTTCGATCCCCGGCATCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna69 (28710589-28710660) Length: 72 bp Type: Ala Anticodon: AGC at 33-35 (28710621-28710623) Score: 84.2 HMM Sc=60.20 Sec struct Sc=24.00 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAGGcCCTGGGTTCAATCCCCAGCACCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna70 (28719704-28719775) Length: 72 bp Type: Ala Anticodon: AGC at 33-35 (28719736-28719738) Score: 84.7 HMM Sc=61.10 Sec struct Sc=23.60 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAGGcCCCGGGTTCAATCCCCGGCACCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna71 (28726018-28726091) Length: 74 bp Type: Thr Anticodon: AGT at 35-37 (28726052-28726054) Score: 80.7 HMM Sc=59.80 Sec struct Sc=20.90 * | * | * | * | * | * | * | Seq: GGCTCCGTAGCTTAGTTGGTtAAAGCGCCTGTCTAGTAAACAGGAGAtCCTGGGTTCGACTCCCAGCGGGGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna72 (28729315-28729386) Length: 72 bp Type: Ala Anticodon: CGC at 33-35 (28729347-28729349) Score: 76.1 HMM Sc=56.20 Sec struct Sc=19.90 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCGCGTGCTTCGCATGTACGAGGcCCCGGGTTCGACCCCCGGCTCCTCCA Str: >>>>>.>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. chr6.trna73 (28747744-28747816) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (28747777-28747779) Score: 74.9 HMM Sc=59.70 Sec struct Sc=15.20 * | * | * | * | * | * | * | Seq: GCCTGGATAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACGGtGCAGGGTTCAAGTCCCTGTTCAGGCG Str: >>>>>>>..>.>>........<<.<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna74 (28764387-28764463) Length: 77 bp Type: Phe Anticodon: GAA at 34-36 (28764420-28764422) Score: 65.8 Filtered: HMM Sc=57.20 Sec struct Sc=8.60 * | * | * | * | * | * | * | * Seq: GCCAAAATTGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGtCCCTGGTTCGATCCCGGGTTTcaccaGGTT Str: >>>.>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.....<<<. chr6.trna75 (28881388-28881460) Length: 73 bp Type: Arg Anticodon: CCG at 34-36 (28881421-28881423) Score: 67.0 HMM Sc=49.40 Sec struct Sc=17.60 * | * | * | * | * | * | * | Seq: GGCCGCGTGGCCTAATGGAtAAGGCGTCTGATTCCGGATCAGAAGAtTGAGGGTTCGAGTCCCTTCGTGGTCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna76 (28941053-28941157) Length: 105 bp Type: Leu Anticodon: CAA at 35-37 (28941087-28941089) Score: 77.2 Possible intron: 39-60 (28941091-28941112) HMM Sc=53.10 Sec struct Sc=24.10 * | * | * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGcttggcttcctcgtgttgaggaTTCTGGTCTCCAATGGAGGCGTGGGTTCGAATCCCACTTCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>.............................<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna77 (28944575-28944647) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (28944608-28944610) Score: 77.4 HMM Sc=55.00 Sec struct Sc=22.40 * | * | * | * | * | * | * | Seq: GCCTCCTTAGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGtCCTGAGTTCGAACCTCAGAGGGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna78 (28951029-28951101) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (28951062-28951064) Score: 87.8 HMM Sc=67.30 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGtCCAGGGTTCAAGTCCCTGTTCGGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna79 (28982199-28982270) Length: 72 bp Type: Glu Anticodon: CTC at 34-36 (28982232-28982234) Score: 73.2 HMM Sc=49.00 Sec struct Sc=24.20 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGTtAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna80 (28989002-28989083) Length: 82 bp Type: Leu Anticodon: AAG at 35-37 (28989036-28989038) Score: 73.8 HMM Sc=54.10 Sec struct Sc=19.70 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGCGGTctAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGgCGTGGGTTCAAATCCCACCGCTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<. chr6.trna81 (37320219-37320291) Length: 73 bp Type: Gln Anticodon: TTG at 34-36 (37320252-37320254) Score: 20.6 Filtered, Possible pseudogene: HMM Sc=16.50 Sec struct Sc=4.10 * | * | * | * | * | * | * | Seq: GTGcAGAGTAGTACAGTGGTTAAACCATGGTCTTTGGAGCCAGACTgCCTGGGGTCGGATCCCAGCTCTCACA Str: >>>.>>>>..>>...........<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<. chr6.trna82 (57800211-57800284) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (57800245-57800247) Score: 78.2 HMM Sc=62.20 Sec struct Sc=16.00 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTCGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTGCCGGTCA Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna83 (57808645-57808718) Length: 74 bp Type: Met Anticodon: CAT at 34-36 (57808678-57808680) Score: 41.7 Filtered, Possible pseudogene: HMM Sc=37.70 Sec struct Sc=4.00 * | * | * | * | * | * | * | Seq: GTCTTCTTAGCGCAGTGAGcAGCGCGTCAGTCTCATAATCTGAAGGtCCTGAtGTTCGAGCCTGAGAAAAGGCA Str: >>>>>.>..>>>>........<<<<.>>>>.........<<<<.....>>.>.>.......<<.<<<.<<<<<. chr6.trna84 (57822973-57823046) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (57823007-57823009) Score: 81.9 HMM Sc=65.50 Sec struct Sc=16.40 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGCGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACGGGCCA Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr6.trna85 (69204486-69204568) Length: 83 bp Type: Leu Anticodon: TAA at 34-36 (69204519-69204521) Score: 37.1 Filtered, Possible pseudogene: HMM Sc=42.90 Sec struct Sc=-5.80 * | * | * | * | * | * | * | * | Seq: ACTCATTTGGCTGAGTGGTtAAGGCATTGGACTTAAGATCCAATGGAGTAGTGGCTGTGTGGGTTTAAACCCCACTACTGGTA Str: >>>..>...>>>..........<<<.>>>>>.......<<<<<.......>....<..>>>>>.......<<<<<.<..<<<. chr6.trna86 (142257639-142257709) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (142257671-142257673) Score: 48.7 Filtered: HMM Sc=34.80 Sec struct Sc=13.90 * | * | * | * | * | * | * | Seq: GCATGGGTGATTCAGTGGTAGAATTTTCACCTGCCATGCAGGAGGTCCAGGTTCATTTCCTGGCCTATGCA Str: >>>>>>>..>>>>.......<<<<.>>..>.......<..<<....>>>>>.......<<<<<<<<<<<<. chr6.trna87 (144216547-144216629) Length: 83 bp Type: Leu Anticodon: TAA at 34-36 (144216580-144216582) Score: 88.7 HMM Sc=58.10 Sec struct Sc=30.60 * | * | * | * | * | * | * | * | Seq: ACCAGGATGGCCGAGTGGTtAAGGCGTTGGACTTAAGATCCAATGGACATATGTCCGCGTGGGTTCGAACCCCACTCCTGGTA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna88 (145182723-145182794) Length: 72 bp Type: Gln Anticodon: TTG at 34-36 (145182756-145182758) Score: 58.1 HMM Sc=40.00 Sec struct Sc=18.10 * | * | * | * | * | * | * | Seq: GGTCCCATGGTGTAATGGTtAGCACTCTGGGCTTTGAATCCAGCAaTCCGAGTTCGAATCTTGGTGGGACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna89 (158403688-158403616) Length: 73 bp Type: Val Anticodon: AAC at 34-36 (158403655-158403653) Score: 33.8 Filtered: HMM Sc=25.70 Sec struct Sc=8.10 * | * | * | * | * | * | * | Seq: GTTTCCATAGCGTAGTAATtATCAAGTTTGCCTAACACGCGAAATGtCCCCGGTTCAAAACCGGGCGGAAACA Str: >>>>>>.....>..........<...>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<<<. chr6.trna91 (125780318-125780247) Length: 72 bp Type: Glu Anticodon: CTC at 34-36 (125780285-125780283) Score: 73.2 HMM Sc=49.00 Sec struct Sc=24.20 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGTtAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna92 (78958365-78958293) Length: 73 bp Type: Phe Anticodon: GAA at 34-36 (78958332-78958330) Score: 45.5 Filtered, Possible pseudogene: HMM Sc=45.40 Sec struct Sc=0.10 * | * | * | * | * | * | * | Seq: GCCAAAATAGCTCAGCTGGGAGAGCATTAGACTGAAGATCTAAAGGtCTCTGGTTTGATCCTGGGTTTCAGAA Str: .>..>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<..<.. chr6.trna93 (57870417-57870345) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (57870384-57870382) Score: 53.1 HMM Sc=35.40 Sec struct Sc=17.70 * | * | * | * | * | * | * | Seq: GGGGAATTAGCCCAAGTGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGTGGGATCGATGCCCACATTCTCCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna94 (57861238-57861166) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (57861205-57861203) Score: 46.4 Filtered: HMM Sc=32.30 Sec struct Sc=14.10 * | * | * | * | * | * | * | Seq: GGGGAATTAGCGCAAGTGGTAGAGTGCTTGCTTAGCATGCAAGAGGtAGTGGGATCGATGCCCACATTCTCCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna95 (57856473-57856401) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (57856440-57856438) Score: 60.0 HMM Sc=36.00 Sec struct Sc=24.00 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGTGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGTGGGATCGATGCCCACATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna96 (57842286-57842214) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (57842253-57842251) Score: 66.2 HMM Sc=46.20 Sec struct Sc=20.00 * | * | * | * | * | * | * | Seq: GCCCTCTTAGTGCAGCTGGCAGCGCGTCAGTTTCATAATCTGAAAGtCCTGAGTTCAAGCCTCAGAGAGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna97 (57838422-57838350) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (57838389-57838387) Score: 58.7 HMM Sc=34.60 Sec struct Sc=24.10 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGCGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGTGGGATCGATGCCCACATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna98 (57830244-57830172) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (57830211-57830209) Score: 26.3 Filtered: HMM Sc=15.20 Sec struct Sc=11.10 * | * | * | * | * | * | * | Seq: GAAGAAGTAGCTCAAGTGGTCGAGTGCTCGCTTAGCATGTGAGAGGtAGTGGGATTGATGCCCACATTCTCCA Str: >.>>>>...>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<.<. chr6.trna99 (57816046-57815974) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (57816013-57816011) Score: 57.2 HMM Sc=31.70 Sec struct Sc=25.50 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGCGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGCAGGATCGATGCCTGCATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna100 (57813562-57813490) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (57813529-57813527) Score: 49.5 Filtered: HMM Sc=31.80 Sec struct Sc=17.70 * | * | * | * | * | * | * | Seq: GAGGAATTAGCTCAGGCGGTAGAGCGCTCGCTTAGCATGCGAGAGGtAGCGGGATCGACGCCCGCATTCTCCA Str: >.>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<.<. chr6.trna101 (57793617-57793545) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (57793584-57793582) Score: 49.5 Filtered: HMM Sc=32.50 Sec struct Sc=17.00 * | * | * | * | * | * | * | Seq: GGGGGATTAGCTCAAGCGGTAGAGCGCCTGCTTAGCATGCAAGAGGtAGCAGGATCGATGCCTGCATTCTCCA Str: >>>>>>>..>>>>........<<<<.>.>>>.......<<<.<.....>>>>>.......<<<<<<<<<<<<. chr6.trna102 (57792905-57792833) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (57792872-57792870) Score: 41.6 Filtered: HMM Sc=24.90 Sec struct Sc=16.70 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGCGGTAGAGCGCTCCCTTAGCATGCGAGAGGtAGCGGGATCGACGCCCGCATTCTCTA Str: >>>>>>>..>>>>........<<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna103 (28981744-28981672) Length: 73 bp Type: Phe Anticodon: GAA at 34-36 (28981711-28981709) Score: 88.9 HMM Sc=68.40 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGtCCCTGGTTCGATCCCGGGTTTCGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna104 (28953337-28953265) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (28953304-28953302) Score: 77.4 HMM Sc=55.00 Sec struct Sc=22.40 * | * | * | * | * | * | * | Seq: GCCTCCTTAGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGtCCTGAGTTCGAACCTCAGAGGGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna105 (28943703-28943622) Length: 82 bp Type: Leu Anticodon: AAG at 35-37 (28943669-28943667) Score: 74.8 HMM Sc=55.10 Sec struct Sc=19.70 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGCGGTctAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGgCGTGGGTTCGAATCCCACCGCTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<. chr6.trna106 (28941672-28941601) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (28941639-28941637) Score: 71.5 HMM Sc=44.00 Sec struct Sc=27.50 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTtAGCACTCTGGACTCTGAATCCAGCGaTCCGAGTTCAAATCTCGGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna107 (28896328-28896223) Length: 106 bp Type: Leu Anticodon: CAA at 35-37 (28896294-28896292) Score: 77.2 Possible intron: 39-61 (28896290-28896268) HMM Sc=53.10 Sec struct Sc=24.10 * | * | * | * | * | * | * | * | * | * | * Seq: GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGctaagcttcctccgcggtggggaTTCTGGTCTCCAATGGAGGCGTGGGTTCGAATCCCACTTCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>..............................<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna108 (28863756-28863685) Length: 72 bp Type: Ala Anticodon: AGC at 33-35 (28863724-28863722) Score: 84.7 HMM Sc=61.10 Sec struct Sc=23.60 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAGGcCCCGGGTTCAATCCCCGGCACCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna109 (28838515-28838444) Length: 72 bp Type: Ala Anticodon: AGC at 33-35 (28838483-28838481) Score: 84.7 HMM Sc=61.10 Sec struct Sc=23.60 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAGGcCCCGGGTTCAATCCCCGGCACCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna110 (28827484-28827413) Length: 72 bp Type: Asp Anticodon: ATC at 33-35 (28827452-28827450) Score: 34.9 Filtered: HMM Sc=19.20 Sec struct Sc=15.70 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGTGGTAGAGAGTGTACTTATCATGCACGAGGtCTTGGGCTGATTCCCCAGTACCTCCA Str: >>>>>>>...>>>.......<<<..>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna111 (28823389-28823316) Length: 74 bp Type: Phe Anticodon: GAA at 34-36 (28823356-28823354) Score: 75.5 HMM Sc=56.80 Sec struct Sc=18.70 * | * | * | * | * | * | * | Seq: GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACCGAAGATCTtAAAGGtCCCTGGTTCAATCCCGGGTTTCGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<.<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna112 (28817306-28817235) Length: 72 bp Type: Ala Anticodon: TGC at 33-35 (28817274-28817272) Score: 75.3 HMM Sc=47.10 Sec struct Sc=28.20 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGTATGAGGcCTCGGGTTCGATCCCCGACACCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna113 (28812143-28812072) Length: 72 bp Type: Ala Anticodon: AGC at 33-35 (28812111-28812109) Score: 74.1 HMM Sc=52.30 Sec struct Sc=21.80 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGCGGTAGAGCGCGTGCTTAGCATGCACGAGGtCCTGGGTTCAATCCCCAATACCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<<<<. chr6.trna114 (28807905-28807833) Length: 73 bp Type: Phe Anticodon: GAA at 34-36 (28807872-28807870) Score: 88.3 HMM Sc=69.20 Sec struct Sc=19.10 * | * | * | * | * | * | * | Seq: GCCGAGATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGtCCCTGGTTCAATCCCGGGTTTCGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna115 (28802870-28802800) Length: 71 bp Type: Ala Anticodon: TGC at 33-35 (28802838-28802836) Score: 60.0 HMM Sc=47.40 Sec struct Sc=12.60 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGTATGAGGcCTCGGTTCGATCcCCGACACCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>........<<<<<<<<<<<. chr6.trna116 (28796035-28795964) Length: 72 bp Type: Ala Anticodon: AGC at 33-35 (28796003-28796001) Score: 84.9 HMM Sc=60.60 Sec struct Sc=24.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAGGtCCTGGGTTCGATCCCCAGTACCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna117 (28790794-28790722) Length: 73 bp Type: Phe Anticodon: GAA at 34-36 (28790761-28790759) Score: 88.9 HMM Sc=68.40 Sec struct Sc=20.50 * | * | * | * | * | * | * | Seq: GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGtCCCTGGTTCGATCCCGGGTTTCGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna118 (28789841-28789770) Length: 72 bp Type: Ala Anticodon: TGC at 33-35 (28789809-28789807) Score: 80.5 HMM Sc=56.50 Sec struct Sc=24.00 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGTATGAGGtCCCGGGTTCGATCCCCGGCACCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna119 (28778838-28778767) Length: 72 bp Type: Ala Anticodon: AGC at 33-35 (28778806-28778804) Score: 22.7 Filtered, Possible pseudogene: HMM Sc=24.10 Sec struct Sc=-1.40 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGACAGAGCACGTGGTTAGCATGCGTGAGGtCCTGCGTTCAACTTCCAGTATTTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>.........<<<<.....>>>.>.......<.<<<<<<<<<<. chr6.trna120 (28763670-28763597) Length: 74 bp Type: Phe Anticodon: GAA at 34-36 (28763637-28763635) Score: 58.8 HMM Sc=42.80 Sec struct Sc=16.00 * | * | * | * | * | * | * | Seq: GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTtAAAGTtCCCTGGTTCAACCCTGGGTTTCAGCC Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<.<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna121 (28758435-28758364) Length: 72 bp Type: Ala Anticodon: TGC at 33-35 (28758403-28758401) Score: 74.2 HMM Sc=54.90 Sec struct Sc=19.30 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCACATGCTTTGCATGTGTGAGGcCCCGGGTTCGATCCCCGGCACCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna122 (28743024-28742952) Length: 73 bp Type: Arg Anticodon: CCG at 34-36 (28742991-28742989) Score: 67.0 HMM Sc=49.40 Sec struct Sc=17.60 * | * | * | * | * | * | * | Seq: GGCCGCGTGGCCTAATGGAtAAGGCGTCTGATTCCGGATCAGAAGAtTGAGGGTTCGAGTCCCTTCGTGGTCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna123 (28735500-28735429) Length: 72 bp Type: Val Anticodon: AAC at 33-35 (28735468-28735466) Score: 69.9 HMM Sc=58.00 Sec struct Sc=11.90 * | * | * | * | * | * | * | Seq: GGGGGTGTAGCTCAGTGGTAGAGCGTATGCTTAACATTCATGAGGcTCTGGGTTCGATCCCCAGCACTTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna124 (28727150-28727078) Length: 73 bp Type: Phe Anticodon: GAA at 34-36 (28727117-28727115) Score: 33.3 Filtered, Possible pseudogene: HMM Sc=46.90 Sec struct Sc=-13.60 * | * | * | * | * | * | * | Seq: GCTGAGATAGCTCGGTTGGGAGGGCATCAGCCTGAAGATCTAAAGGaGACTGGTTCAATTCTGGGTTTTGGCA Str: >>>>>>>..>>>>........<<<<.>.>>.........<<.<......>>>>.......<<<<.<<<<<<<. chr6.trna125 (28696003-28695932) Length: 72 bp Type: Ala Anticodon: CGC at 33-35 (28695971-28695969) Score: 52.8 Filtered: HMM Sc=44.70 Sec struct Sc=8.10 * | * | * | * | * | * | * | Seq: GGGGGTGTAGATCAGTGGTAGAGCGCATGCTTCGCATGTACGAGGtCCCTGGTTCAATCCCTGGTACCTCCA Str: >>>>>>>..>.>>.......<<.<.>.>>>.......<<<.<.....>>.>>.......<<.<<<<<<<<<. chr6.trna126 (28693283-28693210) Length: 74 bp Type: Lys Anticodon: TTT at 35-37 (28693249-28693247) Score: 46.0 Filtered, Possible pseudogene: HMM Sc=45.90 Sec struct Sc=0.10 * | * | * | * | * | * | * | Seq: GCCTGGGTAGCTCAGTCGGTAGAGCtATCAGACTTTTAGCCTGAGGAtTCAGGGTTCAATCCCTTGCTGGGGCG Str: >>>>.>>..>>>>........<<<<..>>>>.........<<<<.....>>>>>.......<<<<<<<.<<<<. chr6.trna127 (28673907-28673836) Length: 72 bp Type: Ala Anticodon: CGC at 33-35 (28673875-28673873) Score: 79.7 HMM Sc=55.30 Sec struct Sc=24.40 * | * | * | * | * | * | * | Seq: GGGGATGTAGCTCAGTGGTAGAGCGCATGCTTCGCATGTATGAGGcCCCGGGTTCGATCCCCGGCATCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna128 (28658308-28658237) Length: 72 bp Type: Ala Anticodon: AGC at 33-35 (28658276-28658274) Score: 76.1 HMM Sc=58.70 Sec struct Sc=17.40 * | * | * | * | * | * | * | Seq: GGGGATGTAGCTCAGTGGTAGAGCGCATGCTTAGCATGCATGAGGtCCCGGGTTCGATCCCCAGCATCTCCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<. chr6.trna129 (28648280-28648207) Length: 74 bp Type: Thr Anticodon: CGT at 35-37 (28648246-28648244) Score: 77.1 HMM Sc=58.30 Sec struct Sc=18.80 * | * | * | * | * | * | * | Seq: GGCTCTGTGGCTTAGTTGGCtAAAGCGCCTGTCTCGTAAACAGGAGAtCCTGGGTTCGAATCCCAGCGGGGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna130 (28634154-28634082) Length: 73 bp Type: Ala Anticodon: TGC at 34-36 (28634121-28634119) Score: 38.1 Filtered, Possible pseudogene: HMM Sc=40.90 Sec struct Sc=-2.80 * | * | * | * | * | * | * | Seq: GGtGGATGTAGTTTAGTGGTAGAACGCGCGCTTTGCATGTATGAGGtCCCGGTTTCGATCCCTGGCGTTTCCA Str: >>.>>>>>..>>>>.......<<<<.>>.>>.......<<.<<.....>>>>.........<<<<<<<<<<<. chr6.trna131 (28597421-28597340) Length: 82 bp Type: Ser Anticodon: GCT at 34-36 (28597388-28597386) Score: 88.4 HMM Sc=61.60 Sec struct Sc=26.80 * | * | * | * | * | * | * | * | Seq: GACGAGGTGGCCGAGTGGTtAAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCATCCTCGTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna132 (28543186-28543114) Length: 73 bp Type: Arg Anticodon: TCG at 34-36 (28543153-28543151) Score: 65.5 HMM Sc=44.80 Sec struct Sc=20.70 * | * | * | * | * | * | * | Seq: GACCACGTGGCCTAATGGAtAAGGCGTCTGACTTCGGATCAGAAGAtTGAGGGTTCGAATCCCTTCGTGGTTG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna133 (28489066-28488993) Length: 74 bp Type: Thr Anticodon: CGT at 35-37 (28489032-28489030) Score: 78.4 HMM Sc=59.30 Sec struct Sc=19.10 * | * | * | * | * | * | * | Seq: GGCTCTATGGCTTAGTTGGTtAAAGCGCCTGTCTCGTAAACAGGAGAtCCTGGGTTCGACTCCCAGTGGGGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna134 (28478704-28478623) Length: 82 bp Type: Leu Anticodon: AAG at 35-37 (28478670-28478668) Score: 64.4 HMM Sc=50.40 Sec struct Sc=14.00 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGTGGTctAAGACGCTGGATTAAGGCTCCAGTCTCTTCGGGGgCGTGGGTTTGAATCCCACCGCTGCCA Str: >>>>>>>..>.>...........<.<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<. chr6.trna135 (28474625-28474552) Length: 74 bp Type: Thr Anticodon: TGT at 35-37 (28474591-28474589) Score: 83.3 HMM Sc=59.90 Sec struct Sc=23.40 * | * | * | * | * | * | * | Seq: GGCTCTATGGCTTAGTTGGTtAAAGCGCCTGTCTTGTAAACAGGAGAtCCTGGGTTCGAATCCCAGTAGAGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna136 (27902978-27902908) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (27902946-27902944) Score: 81.0 HMM Sc=59.90 Sec struct Sc=21.10 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna137 (27902564-27902493) Length: 72 bp Type: iMet Anticodon: CAT at 33-35 (27902532-27902530) Score: 60.4 HMM Sc=30.80 Sec struct Sc=29.60 * | * | * | * | * | * | * | Seq: AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGtCGATGGATCGAAACCATCCTCTGCTA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna138 (27795932-27795861) Length: 72 bp Type: Gln Anticodon: TTG at 34-36 (27795899-27795897) Score: 66.9 HMM Sc=47.20 Sec struct Sc=19.70 * | * | * | * | * | * | * | Seq: GGCCCCATGGTGTAATGGTtAGCACTCTGGACTTTGAATCCAGCGaTCCGAGTTCAAATCTCGGTGGGACCT Str: >>.>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<.<<. chr6.trna139 (27791427-27791356) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (27791394-27791392) Score: 64.7 HMM Sc=45.00 Sec struct Sc=19.70 * | * | * | * | * | * | * | Seq: GGCCCCATGGTGTAATGGTcAGCACTCTGGACTCTGAATCCAGCGaTCCGAGTTCAAATCTCGGTGGGACCC Str: >>.>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<.<<. chr6.trna140 (27753472-27753400) Length: 73 bp Type: Val Anticodon: AAC at 34-36 (27753439-27753437) Score: 79.4 HMM Sc=49.30 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTAACACGCGAAAGGtCCCCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna141 (27728620-27728548) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (27728587-27728585) Score: 49.0 Filtered: HMM Sc=30.40 Sec struct Sc=18.60 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATTATGTTCGCCTCACACGCGAAAAGtCCCCGGTTCGAAATCAGGCGGGAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<. chr6.trna142 (27721201-27721119) Length: 83 bp Type: Leu Anticodon: TAA at 34-36 (27721168-27721166) Score: 90.8 HMM Sc=62.10 Sec struct Sc=28.70 * | * | * | * | * | * | * | * | Seq: ACCGGGATGGCCGAGTGGTtAAGGCGTTGGACTTAAGATCCAATGGGCTGGTGCCCGCGTGGGTTCGAACCCCACTCTCGGTA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna143 (27684768-27684695) Length: 74 bp Type: Thr Anticodon: AGT at 35-37 (27684734-27684732) Score: 81.4 HMM Sc=60.50 Sec struct Sc=20.90 * | * | * | * | * | * | * | Seq: GGCTCCGTGGCTTAGCTGGTtAAAGCGCCTGTCTAGTAAACAGGAGAtCCTGGGTTCGAATCCCAGCGGGGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna144 (27681178-27681106) Length: 73 bp Type: Val Anticodon: AAC at 34-36 (27681145-27681143) Score: 69.2 HMM Sc=47.30 Sec struct Sc=21.90 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTAACACGCGAAAGGtCCGCGGTTCGAAACCGGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<. chr6.trna145 (27672531-27672450) Length: 82 bp Type: Ser Anticodon: CGA at 34-36 (27672498-27672496) Score: 94.6 HMM Sc=62.60 Sec struct Sc=32.00 * | * | * | * | * | * | * | * | Seq: GCTGTGATGGCCGAGTGGTtAAGGTGTTGGACTCGAAATCCAATGGGGGTTCCCCGCGCAGGTTCAAATCCTGCTCACAGCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<..>>>>..<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna146 (27670637-27670565) Length: 73 bp Type: Arg Anticodon: ACG at 34-36 (27670604-27670602) Score: 64.2 HMM Sc=45.60 Sec struct Sc=18.60 * | * | * | * | * | * | * | Seq: GGGCCAGTGGCGCAATGGAtAACGCGTCTGACTACGGATCAGAAGAtTCTAGGTTCGACTCCTGGCTGGCTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna147 (27651000-27650928) Length: 73 bp Type: Val Anticodon: AAC at 34-36 (27650967-27650965) Score: 72.8 HMM Sc=42.70 Sec struct Sc=30.10 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGTAGTGGTtATCACGTTCGCCTAACACGCGAAAGGtCCCTGGATCAAAACCAGGCGGAAACA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna148 (27605745-27605638) Length: 108 bp Type: Leu Anticodon: CAA at 35-37 (27605711-27605709) Score: 78.0 Possible intron: 39-62 (27605707-27605684) HMM Sc=51.40 Sec struct Sc=26.60 * | * | * | * | * | * | * | * | * | * | * Seq: GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGcttactgcttcctgtgttcgggtcTTCTGGTCTCCGTATGGAGGCGTGGGTTCGAATCCCACTTCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>...............................<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna149 (27602675-27602569) Length: 107 bp Type: Leu Anticodon: CAA at 35-37 (27602641-27602639) Score: 77.3 Possible intron: 39-61 (27602637-27602615) HMM Sc=51.00 Sec struct Sc=26.30 * | * | * | * | * | * | * | * | * | * | * Seq: GTCAGGATGGCCGAGTGGTctAAGGCGCCAGACTCAAGttgctacttcccaggtttggggcTTCTGGTCTCCGCATGGAGGCGTGGGTTCGAATCCCACTTCTGACA Str: >>>>>>>..>>>...........<<<.>>>>>..............................<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna150 (27592892-27592821) Length: 72 bp Type: iMet Anticodon: CAT at 33-35 (27592860-27592858) Score: 60.4 HMM Sc=30.80 Sec struct Sc=29.60 * | * | * | * | * | * | * | Seq: AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGtCGATGGATCGAAACCATCCTCTGCTA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna151 (27591886-27591814) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (27591853-27591851) Score: 86.8 HMM Sc=65.70 Sec struct Sc=21.10 * | * | * | * | * | * | * | Seq: GCCTGGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGtCCAGGGTTCAAGTCCCTGTTCAGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna152 (27583528-27583457) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (27583495-27583493) Score: 58.2 HMM Sc=35.70 Sec struct Sc=22.50 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATAGTGGTgAGTGTCCCCGTCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCGACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna153 (27553494-27553413) Length: 82 bp Type: Ser Anticodon: AGA at 34-36 (27553461-27553459) Score: 78.8 HMM Sc=53.30 Sec struct Sc=25.50 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGTGATGGACTAGAAACCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACTACG Str: >>>>>>>..>>>..........<<<.>>>>.........<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna154 (27547823-27547752) Length: 72 bp Type: Gln Anticodon: CTG at 34-36 (27547790-27547788) Score: 70.9 HMM Sc=43.40 Sec struct Sc=27.50 * | * | * | * | * | * | * | Seq: GGTTCCATGGTGTAATGGTtAGCACTCTGGACTCTGAATCCAGCGaTCCGAGTTCAAGTCTCGGTGGAACCT Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chr6.trna155 (27541856-27541775) Length: 82 bp Type: Ser Anticodon: AGA at 34-36 (27541823-27541821) Score: 90.3 HMM Sc=57.50 Sec struct Sc=32.80 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGCGATGGACTAGAAATCCATTGGGGTTTCCCCGCGCAGGTTCGAATCCTGCCGACTACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna156 (27505909-27505828) Length: 82 bp Type: Ser Anticodon: TGA at 34-36 (27505876-27505874) Score: 84.0 HMM Sc=56.20 Sec struct Sc=27.80 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGCGATGGACTTGAAATCCATTGGGGTTTCCCCGCGCAGGTTCGAATCCTGTCGGCTACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna157 (27335062-27334990) Length: 73 bp Type: Lys Anticodon: TTT at 34-36 (27335029-27335027) Score: 85.2 HMM Sc=66.20 Sec struct Sc=19.00 * | * | * | * | * | * | * | Seq: GCCTGGGTAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGtCCAGGGTTCAAGTCCCTGTCCAGGCG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna158 (27333056-27332985) Length: 72 bp Type: iMet Anticodon: CAT at 33-35 (27333024-27333022) Score: 60.4 HMM Sc=30.80 Sec struct Sc=29.60 * | * | * | * | * | * | * | Seq: AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGtCGATGGATCGAAACCATCCTCTGCTA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna159 (27303860-27303789) Length: 72 bp Type: Thr Anticodon: CGT at 33-35 (27303828-27303826) Score: 37.0 Filtered: HMM Sc=30.10 Sec struct Sc=6.90 * | * | * | * | * | * | * | Seq: GGCAGAGTGGTGCAGCGGAAGCGTGCTGGGCCCGTAACCCAGAGGtCAATGGATCGAAGCCATCCTTGGCTA Str: >>>.>>>..>>>>.......<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<.<<<. chr6.trna160 (27280342-27280270) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (27280309-27280307) Score: 80.5 HMM Sc=51.70 Sec struct Sc=28.80 * | * | * | * | * | * | * | Seq: GCTTCTGTAGTGTAGTGGTtATCACGTTCGCCTCACACGCGAAAGGtCCCCGGTTCGAAACCGGGCAGAAGCA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna161 (27275284-27275211) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (27275250-27275248) Score: 84.9 HMM Sc=64.10 Sec struct Sc=20.80 * | * | * | * | * | * | * | Seq: GGCTGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACTGGCCA Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna162 (27237644-27237571) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (27237610-27237608) Score: 81.2 HMM Sc=64.80 Sec struct Sc=16.40 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACGGGCCA Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr6.trna163 (27230637-27230555) Length: 83 bp Type: Leu Anticodon: TAA at 34-36 (27230604-27230602) Score: 83.8 HMM Sc=58.90 Sec struct Sc=24.90 * | * | * | * | * | * | * | * | Seq: ACCGGGATGGCTGAGTGGTtAAGGCGTTGGACTTAAGATCCAATGGACAGGTGTCCGCGTGGGTTCGAGCCCCACTCCCGGTA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>>..<<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna164 (27213916-27213844) Length: 73 bp Type: Arg Anticodon: ACG at 34-36 (27213883-27213881) Score: 64.2 HMM Sc=45.60 Sec struct Sc=18.60 * | * | * | * | * | * | * | Seq: GGGCCAGTGGCGCAATGGAtAACGCGTCTGACTACGGATCAGAAGAtTCTAGGTTCGACTCCTGGCTGGCTCG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna165 (27206160-27206088) Length: 73 bp Type: Val Anticodon: CAC at 34-36 (27206127-27206125) Score: 63.1 HMM Sc=42.50 Sec struct Sc=20.60 * | * | * | * | * | * | * | Seq: GTTTCCGTAGTGGAGTGGTtATCACGTTCGCCTCACACGCGAAAGGtCCCCGGTTTGAAACCAGGCGGAAACA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<. chr6.trna166 (27177288-27177215) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (27177254-27177252) Score: 81.2 HMM Sc=64.80 Sec struct Sc=16.40 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACGGGCCA Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr6.trna167 (26828299-26828227) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26828266-26828264) Score: 58.9 HMM Sc=34.90 Sec struct Sc=24.00 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGTGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGTGGGATCAATGCCCACATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna168 (26819181-26819109) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26819148-26819146) Score: 60.0 HMM Sc=36.00 Sec struct Sc=24.00 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGTGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGTGGGATCGATGCCCACATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna169 (26814411-26814339) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26814378-26814376) Score: 60.1 HMM Sc=36.10 Sec struct Sc=24.00 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGTGGTAGAGCGCTTGCTTAGCACGCAAGAGGtAGTGGGATCGATGCCCACATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna170 (26800185-26800113) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (26800152-26800150) Score: 79.2 HMM Sc=55.30 Sec struct Sc=23.90 * | * | * | * | * | * | * | Seq: GCCCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCATAATCTGAAGGtCCTGAGTTCAAGCCTCAGAGAGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna171 (26796281-26796209) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26796248-26796246) Score: 58.7 HMM Sc=34.60 Sec struct Sc=24.10 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAGCGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGTGGGATCGATGCCCACATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna172 (26788018-26787946) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26787985-26787983) Score: 24.8 Filtered: HMM Sc=14.00 Sec struct Sc=10.80 * | * | * | * | * | * | * | Seq: GAAGAAGTAGCTCAAGTGGTGGAGTGCTCGCTTAGCATGTGAGAGGtAGTGGGATTGATGCCCACATTCTCCA Str: >.>>>>...>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<.<<<<.<. chr6.trna173 (26773633-26773561) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26773600-26773598) Score: 47.3 Filtered: HMM Sc=29.20 Sec struct Sc=18.10 * | * | * | * | * | * | * | Seq: GGGGAATTGGCTCAAGCGGTAGAGCGCTTGCTTAGCATGCAAGAGGtAGCAGGATCGACGCCTGCACTCTCCA Str: >>>>>.>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<.<<<<<. chr6.trna174 (26771152-26771080) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26771119-26771117) Score: 58.3 HMM Sc=34.20 Sec struct Sc=24.10 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAGGCGGTAGAGCGCTCGCTTAGCATGCGAGAGGtAGCGGGATCGACGCCCGCATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna175 (26749984-26749912) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26749951-26749949) Score: 40.0 Filtered: HMM Sc=26.90 Sec struct Sc=13.10 * | * | * | * | * | * | * | Seq: GGGGGATTAGCTCAAGCGGTAGGGTGCCTGCTTAGCATGCAAGAGGtAGCAGGATCGACGCCTGCATTCTCCA Str: >>>>>>>..>>>>........<<<<.>.>>>.......<<<.<.....>>>>>.......<<<<<<<<<<<<. chr6.trna176 (26749272-26749199) Length: 74 bp Type: Undet Anticodon: NNN at 0-0 (0-0) Score: 31.4 Filtered: HMM Sc=13.60 Sec struct Sc=17.80 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAGGCGGTGGAGCGCTCGCTTAGcTATGCGAGAGGtAGCGAGATCGACGCCCGCATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>........<<<<<.....>>>.>.......<.<<<<<<<<<<. chr6.trna177 (26735442-26735370) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (26735409-26735407) Score: 80.2 HMM Sc=56.30 Sec struct Sc=23.90 * | * | * | * | * | * | * | Seq: GCCCTCTTAGCGCAGCGGGcAGCGCGTCAGTCTCATAATCTGAAGGtCCTGAGTTCGAGCCTCAGAGAGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna178 (26721065-26720992) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (26721031-26721029) Score: 81.2 HMM Sc=64.80 Sec struct Sc=16.40 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTcAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACGGGCCA Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr6.trna179 (26571936-26571864) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (26571903-26571901) Score: 58.9 HMM Sc=34.90 Sec struct Sc=24.00 * | * | * | * | * | * | * | Seq: GGGGAATTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtAGCGGGATCGATGCCCGCATTCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna180 (26532990-26532917) Length: 74 bp Type: Thr Anticodon: AGT at 35-37 (26532956-26532954) Score: 81.4 HMM Sc=60.50 Sec struct Sc=20.90 * | * | * | * | * | * | * | Seq: GGCTCCGTGGCTTAGCTGGTtAAAGCGCCTGTCTAGTAAACAGGAGAtCCTGGGTTCGAATCCCAGCGGGGCCT Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna181 (26331515-26331444) Length: 72 bp Type: Trp Anticodon: CCA at 33-35 (26331483-26331481) Score: 73.3 HMM Sc=50.60 Sec struct Sc=22.70 * | * | * | * | * | * | * | Seq: GACCTCGTGGCGCAACGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCAAATCACGTCGGGGTCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna182 (26330372-26330301) Length: 72 bp Type: iMet Anticodon: CAT at 33-35 (26330340-26330338) Score: 60.4 HMM Sc=30.80 Sec struct Sc=29.60 * | * | * | * | * | * | * | Seq: AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGtCGATGGATCGAAACCATCCTCTGCTA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna183 (26319173-26319102) Length: 72 bp Type: Trp Anticodon: CCA at 33-35 (26319141-26319139) Score: 73.3 HMM Sc=50.60 Sec struct Sc=22.70 * | * | * | * | * | * | * | Seq: GACCTCGTGGCGCAACGGTAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCAAATCACGTCGGGGTCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna184 (26313195-26313124) Length: 72 bp Type: iMet Anticodon: CAT at 33-35 (26313163-26313161) Score: 60.4 HMM Sc=30.80 Sec struct Sc=29.60 * | * | * | * | * | * | * | Seq: AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGtCGATGGATCGAAACCATCCTCTGCTA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr6.trna185 (26312677-26312596) Length: 82 bp Type: Ser Anticodon: TGA at 34-36 (26312644-26312642) Score: 89.7 HMM Sc=56.90 Sec struct Sc=32.80 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGCGATGGACTTGAAATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACTACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr6.trna186 (26311818-26311747) Length: 72 bp Type: Gln Anticodon: TTG at 34-36 (26311785-26311783) Score: 66.9 HMM Sc=47.20 Sec struct Sc=19.70 * | * | * | * | * | * | * | Seq: GGCCCCATGGTGTAATGGTtAGCACTCTGGACTTTGAATCCAGCGaTCCGAGTTCAAATCTCGGTGGGACCT Str: >>.>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<.<<. chr6.trna187 (26311267-26311196) Length: 72 bp Type: Gln Anticodon: TTG at 34-36 (26311234-26311232) Score: 66.9 HMM Sc=47.20 Sec struct Sc=19.70 * | * | * | * | * | * | * | Seq: GGCCCCATGGTGTAATGGTtAGCACTCTGGACTTTGAATCCAGCGaTCCGAGTTCAAATCTCGGTGGGACCT Str: >>.>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<.<<. chr6.trna188 (26305573-26305490) Length: 84 bp Type: Ser Anticodon: GCT at 36-38 (26305538-26305536) Score: 71.6 HMM Sc=55.20 Sec struct Sc=16.40 * | * | * | * | * | * | * | * | Seq: GGAGAGGccTGGCCGAGTGGTtAAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCATCCTCGTCG Str: >>.>>>>....>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<.<<. chr7.trna1 (12601964-12602047) Length: 84 bp Type: Lys Anticodon: CTT at 42-44 (12602005-12602007) Score: 31.1 Filtered, Possible truncation, pseudogene: HMM Sc=31.00 Sec struct Sc=0.10 * | * | * | * | * | * | * | * | Seq: GtttTGTTTCttattgggggaaGTCGGTAGAACATGAGATTCTTAATCTCAGGGtCCTGGGTTTAAGCCCCAGgttGGGAGCCA Str: >......>>>...................<<<..>>>>>.......<<<<<.....>>>>>.......<<<<<.........<. chr7.trna3 (99469684-99469755) Length: 72 bp Type: Trp Anticodon: CCA at 33-35 (99469716-99469718) Score: 68.8 HMM Sc=46.10 Sec struct Sc=22.70 * | * | * | * | * | * | * | Seq: GACCTCGTGGCGCAACGGCAGCGCGTCTGACTCCAGATCAGAAGGtTGCGTGTTCAAATCACGTCGGGGTCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna4 (128783450-128783521) Length: 72 bp Type: Pro Anticodon: AGG at 33-35 (128783482-128783484) Score: 70.2 HMM Sc=43.80 Sec struct Sc=26.40 * | * | * | * | * | * | * | Seq: GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGAGGtCCCGGGTTCAAATCCCGGACGAGCCC Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna5 (139340700-139340772) Length: 73 bp Type: Arg Anticodon: CCT at 34-36 (139340733-139340735) Score: 65.6 HMM Sc=51.50 Sec struct Sc=14.10 * | * | * | * | * | * | * | Seq: GCCCCAGTGGCCTAATGGAtAAGGCATTGGCCTCCTAAGCCAGGGAtTGTGGGTTCGAGTCCCATCTGGGGTG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna8 (149310190-149310261) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149310222-149310224) Score: 84.1 HMM Sc=61.60 Sec struct Sc=22.50 * | * | * | * | * | * | * | Seq: GGGGGCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCTGGTTCAAATCCAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna9 (149331129-149331200) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149331161-149331163) Score: 77.2 HMM Sc=56.90 Sec struct Sc=20.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCTGGTTCAAATCCAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna10 (149546540-149546611) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149546572-149546574) Score: 70.0 HMM Sc=50.50 Sec struct Sc=19.50 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCACTTGACTGCAGATCAAGAAGtCCTTGGTTCAAATCCAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna11 (149556711-149556780) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (149556743-149556745) Score: 64.9 HMM Sc=43.60 Sec struct Sc=21.30 * | * | * | * | * | * | * Seq: GGGCGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCAGTTCAAATCTGGGTGCCCA Str: >>>>..>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<. chr7.trna12 (149558042-149558114) Length: 73 bp Type: Tyr Anticodon: GTA at 34-36 (149558075-149558077) Score: 48.2 Filtered: HMM Sc=39.80 Sec struct Sc=8.40 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGCTAGAGCtTTTTGACTGTAGAGCAAGAGGtCCCTGGTTCAAATCCAGGTTCTCCCT Str: >>>>>.>..>>>>.......<<<<..>>>>.........<<<<.....>>>>>.......<<<<<<.<<<<<. chr7.trna13 (149584725-149584796) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149584757-149584759) Score: 70.5 HMM Sc=52.20 Sec struct Sc=18.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCTCTGGTTCAAATCCAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna14 (149597955-149598026) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149597987-149597989) Score: 65.6 HMM Sc=50.70 Sec struct Sc=14.90 * | * | * | * | * | * | * | Seq: GGGCGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCAGTTCAAATCTGGGTGCCCCCT Str: >>>.>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<. chr7.trna15 (149608376-149608447) Length: 72 bp Type: Ser Anticodon: AGA at 33-35 (149608408-149608410) Score: 58.7 Filtered: HMM Sc=51.30 Sec struct Sc=7.40 * | * | * | * | * | * | * | Seq: GGGTGTATGGCTCAGGGGTAGAGAATTTGACTAGAGATCAAGAGGtCCCTGGTTCAAATCCAGGTGCCCCCT Str: >>>.>>>...>>>.......<<<..>>>>>.......<<<<<.....>>>>>.......<<<<<<<<.<<<. chr7.trna16 (149628153-149628235) Length: 83 bp Type: Cys Anticodon: GCA at 29-31 (149628181-149628183) Score: 26.6 Filtered: HMM Sc=19.10 Sec struct Sc=7.50 * | * | * | * | * | * | * | * | Seq: GtATAGCTCAGGGGTAGAGTATTGGACTGCAGATCCAACaGGaCACCAGTTCAAatacagataacccCTCTGGcTTTTCAATT Str: >.>..>>>>.......<<<<.>>>>>.......<<<<<......>>>>>....................<<<<.<<.....<. chr7.trna17 (149635687-149635758) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149635719-149635721) Score: 77.2 HMM Sc=56.90 Sec struct Sc=20.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCTGGTTCAAATCCAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna18 (149664824-149664895) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149664856-149664858) Score: 60.7 HMM Sc=44.40 Sec struct Sc=16.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCACAGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCAAATCTGGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna19 (149707669-149707740) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149707701-149707703) Score: 77.2 HMM Sc=56.90 Sec struct Sc=20.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCTGGTTCAAATCCAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna20 (149691252-149691181) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149691220-149691218) Score: 70.7 HMM Sc=53.60 Sec struct Sc=17.10 * | * | * | * | * | * | * | Seq: GGGGATATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCAAATCCGGGTGCCCCCC Str: >>>>.>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. chr7.trna21 (149647026-149646955) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149646994-149646992) Score: 72.4 HMM Sc=51.80 Sec struct Sc=20.60 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTTAGGGGTAGAGCATTTGACTGCAGATCAAAAGGtCCCTGGTTCAAATCCAGGTGCCCCTT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna22 (149613136-149613065) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149613104-149613102) Score: 69.2 HMM Sc=49.40 Sec struct Sc=19.80 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCATTTGACTGCAAATCAAGAGGtCCCTGATTCAAATCCAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>.........<<<<<<<<<<<. chr7.trna23 (149595285-149595214) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149595253-149595251) Score: 59.1 HMM Sc=44.40 Sec struct Sc=14.70 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCACAGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCAAATCCGGTTACTCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<<<<. chr7.trna24 (149589144-149589073) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149589112-149589110) Score: 79.1 HMM Sc=56.40 Sec struct Sc=22.70 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCACTTGACTGCAGATCAAGAGGtCCCTGGTTCAAATCCAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna25 (149415209-149415138) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149415177-149415175) Score: 76.9 HMM Sc=57.80 Sec struct Sc=19.10 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTTAGCGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCGGTTCAAATCCGGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna26 (149406135-149406064) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149406103-149406101) Score: 34.0 Filtered: HMM Sc=26.70 Sec struct Sc=7.30 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTGAGGAGTAAACCATTTGGCTGCAGATCAAGTGGtCCCTGGTTCAAATATGGGTGCCCTCT Str: >>>>>>>..>.>.........<.<.>>>>>.......<<<<<.....>>>>.........<<<<<<<<<<<. chr7.trna27 (149377581-149377510) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149377549-149377547) Score: 74.9 HMM Sc=54.70 Sec struct Sc=20.20 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCTGGTTCAAATCCAGGTGCCCCCC Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna28 (149375830-149375759) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149375798-149375796) Score: 71.8 HMM Sc=55.30 Sec struct Sc=16.50 * | * | * | * | * | * | * | Seq: GGGGGTATAGTTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCTGGTTCAAATCCAGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna29 (149356729-149356653) Length: 77 bp Type: Tyr Anticodon: GTA at 33-35 (149356697-149356695) Score: 37.1 Filtered, Possible truncation, pseudogene: HMM Sc=41.40 Sec struct Sc=-4.30 * | * | * | * | * | * | * | * Seq: TCAATTATAGCTCAGTGGTAGAGCATTTAACTGTAGATCAAGAGGtCCCTGGATCAACTCTGGGTGCccccttTAAA Str: >.>..>>..>>>>.......<<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<<.......<.<. chr7.trna30 (149355746-149355675) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (149355714-149355712) Score: 74.0 HMM Sc=50.60 Sec struct Sc=23.40 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAGGtCCCCAGTTCAAATCTGGGTGCCCCCT Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr7.trna31 (97141645-97141573) Length: 73 bp Type: Lys Anticodon: CTT at 31-33 (97141615-97141613) Score: 34.5 Filtered, Possible truncation, pseudogene: HMM Sc=33.10 Sec struct Sc=1.40 * | * | * | * | * | * | * | Seq: GGCaGGCGcTAGTCAGTAGAGCATGAGACTCTTAATCTCAGGGtCGTGGGTTCGAGCCCCACatcGGGCGCCA Str: >>>..>>..>........<.<<.>>>>>.......<<<<<.....>>>>>.......<<<<<.......<<<. chr7.trna32 (67399631-67399560) Length: 72 bp Type: Trp Anticodon: CCA at 33-35 (67399599-67399597) Score: 30.6 Filtered, Possible pseudogene: HMM Sc=34.40 Sec struct Sc=-3.80 * | * | * | * | * | * | * | Seq: GGCCTCATGGTGCAACAGTAGTGTGTCTGACTCCAGATCAGAAGGtTGTATGTTCAAATCACGTAGGGGTCA Str: >>>>>>...>>>>.......<<<<.>>>>>.......<<<<<.....>>.>>.......<<.<<.<<<<<<. chr8.trna1 (11913291-11913362) Length: 72 bp Type: Glu Anticodon: CTC at 34-36 (11913324-11913326) Score: 21.9 Filtered: HMM Sc=14.60 Sec struct Sc=7.30 * | * | * | * | * | * | * | Seq: CCCCTGGTGATCTAGTGGTtAGTCTTTGGCGCTCTCACTGCCACTaCCCGGGTTTGATTTCCGGTCAGGGAA Str: .>>>>>>..>..>........<..<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<.. chr8.trna2 (58592239-58592309) Length: 71 bp Type: Glu Anticodon: CTC at 33-35 (58592271-58592273) Score: 22.8 Filtered: HMM Sc=17.60 Sec struct Sc=5.20 * | * | * | * | * | * | * | Seq: TCCTTGATGTCTAGTGGTtAGGATTTGGTGCTCTCACTGCAGCAgCCTGGGTTCATTTCTCAGTCAGGGAA Str: >>>>>>>.>>>>........<<<<.>.>>>.......<<<.<....>>>>>.......<<<<<<<<<<<<. chr8.trna3 (66113367-66113459) Length: 93 bp Type: Tyr Anticodon: GTA at 34-36 (66113400-66113402) Score: 75.3 Possible intron: 38-57 (66113404-66113423) HMM Sc=47.50 Sec struct Sc=27.80 * | * | * | * | * | * | * | * | * | Seq: CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGctacttcctcagcaggagacATCCTTAGGtCGCTGGTTCGATTCCGGCTCGAAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>...........................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr8.trna4 (66113988-66114076) Length: 89 bp Type: Tyr Anticodon: GTA at 34-36 (66114021-66114023) Score: 75.5 Possible intron: 38-53 (66114025-66114040) HMM Sc=47.60 Sec struct Sc=27.90 * | * | * | * | * | * | * | * | * Seq: CCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGgcgcgcgcccgtggccATCCTTAGGtCGCTGGTTCGATTCCGGCTCGAAGGA Str: >>>>>>>..>>>>........<<<<.>>>>>.......................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr8.trna5 (66114189-66114261) Length: 73 bp Type: Ala Anticodon: AGC at 34-36 (66114222-66114224) Score: 59.7 HMM Sc=36.10 Sec struct Sc=23.60 * | * | * | * | * | * | * | Seq: GGGGGATTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGtAGCGGGATCGATGCCCGCATCCTCCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr8.trna6 (98141234-98141302) Length: 69 bp Type: Undet Anticodon: NNN at 0-0 (0-0) Score: 26.7 Filtered: HMM Sc=11.30 Sec struct Sc=15.40 * | * | * | * | * | * | * Seq: GGTCTTGTGCTCAGTGGAAGCCTCTGTCTGAcCATACAGATGaTCCAGGTTCGAATCCTGGCAAGGCCA Str: >>>>>>>.>>>.......<<<.>>>>>........<<<<<....>>>>>.......<<<<<<<<<<<<. chr8.trna7 (123258557-123258482) Length: 76 bp Type: Undet Anticodon: NNN at 0-0 (0-0) Score: 22.4 Filtered, Possible pseudogene: HMM Sc=24.50 Sec struct Sc=-2.10 * | * | * | * | * | * | * | * Seq: GCCAAAATAGCTCAGCTGGGAGAGTATTAgGTTGAAGAtACAAAGTtCCTTGGCTCAATCCAGAGTTTggggGACT Str: >.>.>>>..>>>>........<<<<.>>..>.........<<<.....>>>.>.......<.<<<<<<....<.<. chr8.trna8 (123157302-123157230) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (123157269-123157267) Score: 82.3 HMM Sc=60.90 Sec struct Sc=21.40 * | * | * | * | * | * | * | Seq: GCCTCGTTAGCGCAGTAGGTAGCGCGTCAGTCTCATAATCTGAAGGtCGTGAGTTCGATCCTCACACGGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. chr8.trna9 (95269738-95269657) Length: 82 bp Type: Ser Anticodon: AGA at 34-36 (95269705-95269703) Score: 89.6 HMM Sc=56.90 Sec struct Sc=32.70 * | * | * | * | * | * | * | * | Seq: GTAGTCGTGGCCGAGTGGTtAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACTACG Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<<. chr8.trna10 (88133080-88133007) Length: 74 bp Type: Gln Anticodon: TTG at 35-37 (88133046-88133044) Score: 21.5 Filtered: HMM Sc=12.90 Sec struct Sc=8.60 * | * | * | * | * | * | * | Seq: GGTACAGTGTTAAAGGGGAgaAAAATTGCTGACTTTGAATaCAGTAGaCCTAGGTTTGAATCCTGGCTTTACCA Str: >>>>.>>...>.............<..>>>>>.......<.<<<<....>>>>>.......<<<<<<<.<<<<. chr8.trna11 (66113013-66112941) Length: 73 bp Type: Arg Anticodon: ACG at 34-36 (66112980-66112978) Score: 24.8 Filtered, Possible pseudogene: HMM Sc=8.50 Sec struct Sc=16.30 * | * | * | * | * | * | * | Seq: AGGCCAGTGGCGCAAGGGAtAACGTGTCTGACCACGCATCAGAAGAtTGTAGGTCCAGCTCCTGCCTGGCTCG Str: .>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.. chr8.trna12 (65697384-65697297) Length: 88 bp Type: Tyr Anticodon: GTA at 34-36 (65697351-65697349) Score: 52.0 Possible intron: 38-53 (65697347-65697332) HMM Sc=34.70 Sec struct Sc=17.30 * | * | * | * | * | * | * | * | * Seq: TCTTCAATAGCTCAGCTGGTAGAGCGGAGGACTGTAGgtgcacgcccgtggccATTCTTAGGTGCTGGTTTGATTCCGACTTGGAGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......................<<<<<....>.>>>.......<<<.<<<<<<<<. chr8.trna13 (10081883-10081813) Length: 71 bp Type: Cys Anticodon: GCA at 32-34 (10081852-10081850) Score: 27.2 Filtered: HMM Sc=18.90 Sec struct Sc=8.30 * | * | * | * | * | * | * | Seq: GGGGGTAGAATTCGGGGTAGAACATTTGACTGCAGATCAAGAGGtCCCCGCTTCGAATCTGGGTACCCCCT Str: >>>>>>>...>>>......<<<..>>>>>.......<<<<<.....>>>>.........<<<<<<<<<<<. chr9.trna1 (2959340-2959418) Length: 79 bp Type: Undet Anticodon: NNN at 0-0 (0-0) Score: 20.5 Filtered, Possible pseudogene: HMM Sc=23.00 Sec struct Sc=-2.50 * | * | * | * | * | * | * | * Seq: GTGTGTATAGCACAGTgcagTGGTAGAGCACTTGCTTCTAAgACGAAAGAaCCTGAGTTCAAGTCTCTacTTTCACACT Str: >>>>>.>..>>.>............<.<<..>>>.........<<<........>>>.......<<<....<.<<<<<. chr9.trna2 (19403998-19404072) Length: 75 bp Type: iMet Anticodon: CAT at 36-38 (19404033-19404035) Score: 37.8 Filtered, Possible pseudogene: HMM Sc=9.30 Sec struct Sc=28.50 * | * | * | * | * | * | * | Seq: AGCAGAGTGGTGCAGTGGAAGCATACctaTGGGCCCATAACCCAGAGGtTGATGGATGGAAACCATCCTCTGCTA Str: >>>>>>>..>>>>.......<<<<.>...>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chr9.trna4 (110198523-110198595) Length: 73 bp Type: Arg Anticodon: TCG at 34-36 (110198556-110198558) Score: 53.7 HMM Sc=40.80 Sec struct Sc=12.90 * | * | * | * | * | * | * | Seq: GGCCGTGTGGCCTAATGGAtAAGGCGTCTGACTTCGGATCAAAAGAtTGCAGGTTTGAGTTCTGCCACGGTCG Str: >>>>>>>..>>>>........<<<<.>.>>>.......<<<.<.....>>>>>.......<<<<<<<<<<<<. chr9.trna5 (128340166-128340076) Length: 91 bp Type: Arg Anticodon: TCT at 34-36 (128340133-128340131) Score: 70.1 Possible intron: 38-55 (128340129-128340112) HMM Sc=49.80 Sec struct Sc=20.30 * | * | * | * | * | * | * | * | * | Seq: GGCTCTGTGGCGCAATGGAtAGCGCATTGGACTTCTAgctgagcctagtgtggtcATTCAAAGGtTGTGGGTTCGAGTCCCACCAGAGTCG Str: >>>>>>>..>>>>........<<<<.>>>>>.........................<<<<<.....>>>>>.......<<<<<<<<<<<<. chr9.trna6 (120355157-120355075) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (120355123-120355121) Score: 31.6 Filtered, Possible pseudogene: HMM Sc=28.70 Sec struct Sc=2.90 * | * | * | * | * | * | * | * | Seq: GTCAGGGTGGCTGAGCAGTctGAGGGGCTGCGTTCAGGTCGCAGTCTGCCCTGGAGGCGTGGGTTCGAATCCCACTCCTGAAA Str: .>>>>>>...>>...........<<..>>>>>.......<<<<<.>>.>...<.<<..>>>>>.......<<<<<<<<<<<.. chr9.trna7 (74903145-74903074) Length: 72 bp Type: Asp Anticodon: GTC at 34-36 (74903112-74903110) Score: 47.6 Filtered: HMM Sc=24.60 Sec struct Sc=23.00 * | * | * | * | * | * | * | Seq: TCCTCGTTAGTATGGTGGTgAGTATCCCTGCCTGTCACGCGGGAGaCCGGGGTTCGATTCCCCAACGGGGAG Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>.......<<<<.<<<<<<<. chr9.trna8 (14434011-14433940) Length: 72 bp Type: His Anticodon: GTG at 34-36 (14433978-14433976) Score: 60.1 HMM Sc=29.80 Sec struct Sc=30.30 * | * | * | * | * | * | * | Seq: GCCGTGATCGTATAGTGGTtAGTACTCTGCGTTGTGGCCGCAGCAaCCTCGGTTCGAATCCGAGTCACGGCA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. chrX.trna2 (119603898-119603966) Length: 69 bp Type: Pro Anticodon: GGG at 34-36 (119603931-119603933) Score: 24.8 Filtered, Possible pseudogene: HMM Sc=20.60 Sec struct Sc=4.20 * | * | * | * | * | * | * Seq: GCAGCTGTGGCTCAGTGGAaAGAGCATCAGTCTGGGTATCAGAAGaCCTAGGTCCTAGcccCAGCTGTA Str: >>>>>>>..>>>>........<<<<.>>.>.........<.<<....>>>>>.<<<<<...<<<<<<<. chrX.trna3 (25262043-25261972) Length: 72 bp Type: Ser Anticodon: GGA at 34-36 (25262010-25262008) Score: 21.6 Filtered: HMM Sc=13.70 Sec struct Sc=7.90 * | * | * | * | * | * | * | Seq: AGTCAAGTGGTTTAGTGGAaAGAACATTGGATTGGAAGTCAAGAGGCCTGGATTCTTGCTCCAGCTTCACCA Str: .>>.>>>..>>>>........<<<<.>>.>>.......<<.<<....>>>>>.......<<<<<<<<.<<.. chrX.trna4 (18674981-18674909) Length: 73 bp Type: Val Anticodon: TAC at 34-36 (18674948-18674946) Score: 82.9 HMM Sc=54.70 Sec struct Sc=28.20 * | * | * | * | * | * | * | Seq: GGTTCCATAGTGTAGTGGTtATCACGTCTGCTTTACACGCAGAAGGtCCTGGGTTCGAGCCCCAGTGGAACCA Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chrX.trna5 (3915717-3915644) Length: 74 bp Type: Ile Anticodon: GAT at 35-37 (3915683-3915681) Score: 46.5 Filtered: HMM Sc=36.40 Sec struct Sc=10.10 * | * | * | * | * | * | * | Seq: GGTCGGTTATCTCAGTTGGTgAGCGCGTGGTGCTGATACCGCCATGGtCGCGGGCTTGATCCCCGCACCGGCCC Str: >>>>>>>...>.>.........<.<..>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chrX.trna6 (3915303-3915230) Length: 74 bp Type: Ile Anticodon: GAT at 35-37 (3915269-3915267) Score: 75.5 HMM Sc=50.20 Sec struct Sc=25.30 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTaAGAGCGTGGTGCTGATAACACCAAGGtCGCGGGCTCGACTCCCGCACCGGCCA Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chrX.trna7 (3877288-3877215) Length: 74 bp Type: Ile Anticodon: GAT at 35-37 (3877254-3877252) Score: 46.5 Filtered: HMM Sc=36.40 Sec struct Sc=10.10 * | * | * | * | * | * | * | Seq: GGTCGGTTATCTCAGTTGGTgAGCGCGTGGTGCTGATACCGCCATGGtCGCGGGCTTGATCCCCGCACCGGCCC Str: >>>>>>>...>.>.........<.<..>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chrX.trna8 (3876874-3876801) Length: 74 bp Type: Ile Anticodon: GAT at 35-37 (3876840-3876838) Score: 75.5 HMM Sc=50.20 Sec struct Sc=25.30 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTaAGAGCGTGGTGCTGATAACACCAAGGtCGCGGGCTCGACTCCCGCACCGGCCA Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. chrX.trna9 (3838864-3838791) Length: 74 bp Type: Ile Anticodon: GAT at 35-37 (3838830-3838828) Score: 38.1 Filtered, Possible pseudogene: HMM Sc=34.50 Sec struct Sc=3.60 * | * | * | * | * | * | * | Seq: GGTCGGTTATCTCAGTTGGTgAGCGCGTGGTGCTGATACCGCCATGGtCGCAGGCTTGATCCCCGCACCGGCCC Str: >>>>>>>...>.>.........<.<..>>>>>.......<<<<<.....>>.>>.......<<.<<<<<<<<<. chrX.trna10 (3838450-3838377) Length: 74 bp Type: Ile Anticodon: GAT at 35-37 (3838416-3838414) Score: 75.5 HMM Sc=50.20 Sec struct Sc=25.30 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTaAGAGCGTGGTGCTGATAACACCAAGGtCGCGGGCTCGACTCCCGCACCGGCCA Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.