tDR Group 1: 3012,5020,3007,3008,3002 tDR Location tRNA-Val-AAC-2:TE_Z tRNA-Val-AAC-3:TLE_Z tRNA-Val-AAC-4:A_DSL tRNA-Val-AAC-5:TE_Z tRNA-Val-AAC-6:A_DSL_TLE_Z tRNA-Val-AAC-7:A_DSL_TE_Z tRNA-Val-AAC-8:TE_Z tRNA-Val-AAC-9:A_DSL_TE_Z tRNA-Val-AAC-11:A_DSL tRNA-Val-AAC-12:TE_Z tRNA-Val-AAC-13:A_DSL_TLE_Z tRNA-Val-AAC-14:A_DSL_TE_Z tRNA-Val-AAC-15:A_DSL tRNA-Val-AAC-16:TE_Z tRNA-Val-AAC-17:A_DSL_TE_Z tRNA-Val-AAC-18:A_DSL_TLE_Z tRNA-Val-AAC-19:A_DSL tRNA-Val-AAC-21:TE_Z tRNA-Val-CAC-2:A_DSL_TE_Z tRNA-Val-CAC-3:A_DSL_TE_Z tRNA-Val-CAC-4:A_DSL_TE_Z tRNA-Val-CAC-5:A_DSL_TE_Z tRNA-Val-CAC-7:A_DSL_TE_Z tRNA-Val-CAC-8:A_DSL tRNA-Val-CAC-9:A_DSL tRNA-Val-CAC-10:A_DSL_TE_Z tRNA-Val-CAC-11:A_DSL tRNA-Val-CAC-13:TE_Z tRNA-Val-CAC-14:TLE_Z tRNA-Val-CAC-15:A_DSL_TE_Z tRNA-Val-CAC-17:A_DSL_TE_Z tRNA-Val-CAC-18:A_DSL_TE_Z tRNA-Val-CAC-19:A_DSL_TE_Z tDR Isotype(s) Val tDR Mismatches U:62:C:1 tDR Alignment # STOCKHOLM 1.0 tRNA-Val-AAC-2 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUAACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACACCA [1] tRNA-Val-AAC-3 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUAACACGCGAAAGGUCCCCGGUUCGAGACCGGGCAGAAACACCA [2] tRNA-Val-AAC-4 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUAACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGGAACACCA [3] tRNA-Val-AAC-5 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUAACACGCGAAAGGUCCCCGGUUCAAAACCGGGCAGAAACACCA [4] tRNA-Val-AAC-6 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUAACACGUGAAAGGUCCCCGGUUCGAGACCGGGCAGAAACACCA [5] tRNA-Val-AAC-7 -GUUUCUGUAGUGUAGC--GGUU-AUCACGUUCGCCUAACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACACCA [6] tRNA-Val-AAC-8 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUUGCCUAACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACACCA [7] tRNA-Val-AAC-9 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUAACACGCGAAAAGUCCCCGGUUCGAAACCGGGCAGAAACACCA [8] tRNA-Val-AAC-11 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUAACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACGCCA [9] tRNA-Val-AAC-12 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUAACCCGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACACCA [10] tRNA-Val-AAC-13 -GUUUCUGUAGUGUAGU--GGUU-AUCAUGUUUGCCUAACACGCGAAAGGUCCCCGGUUCGAGACCGGGCAGAAACACCA [11] tRNA-Val-AAC-14 -GUUUCUGUAGUGUAGU--AGUU-AUCACGUUCGCCUAACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACACCA [12] tRNA-Val-AAC-15 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUAACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAUACACCA [13] tRNA-Val-AAC-16 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUAACACGCGAAAGGUCCCUGCUUCGAAACCGGGCAGAAACACCA [14] tRNA-Val-AAC-17 -GUUUCUGUAGUGUAGU--AGUU-AUCACGUUCGCCUAACACACGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACACCA [15] tRNA-Val-AAC-18 -GUUUCUGUAGUGUAGU--GGUU-GUCACGUUCACCUAACACGCGAAAGGUCCCCGGUUCGAGACCGGGCAGAAACACCA [16] tRNA-Val-AAC-19 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCACCUAACACGCGAAAAGUCCCCGGUUCGAAACCGGCCAGAAACACCA [17] tRNA-Val-AAC-21 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUUGCCUAACAUGUGAAAGGUCCCUGGUUUUAAACCGGGCAGAAACACCA [18] tRNA-Val-CAC-2 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUCACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACACCA [19] tRNA-Val-CAC-3 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCUUCACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACACCA [20] tRNA-Val-CAC-4 -GUUUCUGUAGUGUAGU--GGUU-AUCAUGUUCGCCUCACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACACCA [21] tRNA-Val-CAC-5 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUCACACGCGAAAGUUCCCCGGUUCGAAACCGGGCAGAAACACCA [22] tRNA-Val-CAC-7 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUCACACGCGAAAAGUCCCCGGUUCGAAACCGGGCAGAAACACCA [23] tRNA-Val-CAC-8 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUCACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAGCACCA [24] tRNA-Val-CAC-9 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUCACACGCGAAAGGUCCCCGGUUCGAAACCGUGCAGAAACACCA [25] tRNA-Val-CAC-10 -GUUUCUGUAGUGUAGU--GGUU-AUCCCGUUCGCCUCACACGCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACACCA [26] tRNA-Val-CAC-11 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUCACACGCGAAAGGUCCCCGGUUCGAAACCGCGCAGAAACACCA [27] tRNA-Val-CAC-13 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUCACACGCGAAAAGUCCCCCGUUCGAAACCGGGCAGAAACACCA [28] tRNA-Val-CAC-14 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUCACACGUGAAAGGUCCCCAGUUUGAAACCGGGCAGAAACACCA [29] tRNA-Val-CAC-15 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUCGCCUCACACCCGAAAGGUCCCCGGUUCGAAACCGGGCAGAAACACCA [30] tRNA-Val-CAC-17 -GUUUCUGUAGUGUAGU--GGUU-AUCACGUUUGCCUCACACGCGAAA---CCCCUGUUCGAAACCGGGCAGAAACACCA [31] tRNA-Val-CAC-18 -GUUUCUGUAGUGUAGU--GGUU-AUCACGCUCGCCUCACACGCGAAAGGUGCCCCGUUCGAAACCGGGCAGAAACACCA [32] tRNA-Val-CAC-19 -GUUUCUGUAGUGUAUU--GGUU-AUCACGUUCGCCUCACACGCGAAAGGUCCACGGGUCGAAACCGGGCAGAAACACCA [33] 5020 .GUUUCUGUAGUGUA................................................................. [3,5,6,8,9,11,12,13,15,16,17,19,20,21,22,23,24,25,26,27,30,31,32,33] 3012 ..........................................................UCGAGACCGGGCAGAAACACCA [2,5,11,16] 3002 ..........................................................UUGAAACCGGGCAGAAACACCA [29] 3007 ...............................................................ACCGGGCAGAAACACCA [1,2,4,5,6,7,8,10,11,12,14,15,16,18,19,20,21,22,23,26,28,29,30,31,32,33] 3008 ...............................................................ACUGGGCAGAAACACCA [1,2,4,5,6,7,8,10,11,12,14,15,16,18,19,20,21,22,23,26,28,29,30,31,32,33] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 2: 5022,3011 tDR Location tRNA-Glu-TTC-1:A_DSL_TLE_Z tRNA-Glu-TTC-2:TLE_Z tRNA-Glu-TTC-3:A_DSL_TLE_Z tRNA-Glu-TTC-4:TLE_Z tRNA-Glu-TTC-5:A_DSL_TLE_Z tRNA-Glu-TTC-6:A_DSL tRNA-Glu-TTC-7:A_DSL_TLE_Z tRNA-Glu-TTC-8:A_DSL tRNA-Glu-TTC-9:A_DSL tRNA-Glu-TTC-10:A_DSL_TLE_Z tRNA-Glu-TTC-11:A_DSL tRNA-Glu-TTC-13:A_DSL_TLE_Z tRNA-Glu-TTC-14:A_DSL tRNA-Glu-TTC-15:A_DSL_TLE_Z tDR Isotype(s) Glu tDR Alignment # STOCKHOLM 1.0 tRNA-Glu-TTC-1 -UCCCAUAUGGUCUAGC--GGUU-AGGAUUCCUGGUUUUCACCCAGGCGG-CCCGGGUUCGACUCCCGGUAUGGGAACCA [1] tRNA-Glu-TTC-2 -UCCCGUAUGGUCUAGC--GGUU-AGGAUUCCUGGUUUUCACCCAGGCGG-CCCGGGUUCGACUCCCGGUAUGGGAACCA [2] tRNA-Glu-TTC-3 -UCCCAUAUGGUCUAGC--GGUU-AGGAUUCCUGGUUUUCACCCAGGCGG-CCUGGGUUCGACUCCCGGUAUGGGAACCA [3] tRNA-Glu-TTC-4 -UCCCAUGUGGUCUAGC--GGUU-AGGAUUCCUGGUUUUCACCCAGGCGG-CCUGGGUUCGACUCCCGGUAUGGGAACCA [4] tRNA-Glu-TTC-5 -UCCCAUAUGGUCUAGC--GGUU-AGGAUUCCUGGUUUUCACUCAGGCGG-CCCGGGUUCGACUCCCGGUAUGGGAACCA [5] tRNA-Glu-TTC-6 -UCCCAUAUGGUCUAGC--GGUU-AGGAUUCCUGGUUUUCACCCAGGCGG-CCCGGGUUUGACUCCCGGUAUGGGAACCA [6] tRNA-Glu-TTC-7 -UCCCAUAUGGUCUAGC--GGUU-AGAAUUCCUGGUUUUCACCCAGGCGG-CCCGGGUUCGACUCCCGGUAUGGGAACCA [7] tRNA-Glu-TTC-8 -UCCCAUAUGGUCUAGC--GGUU-AGGAUUCCUGGUUUUCACCCAGGCGG-CCCGGGUUCGACUGCCGGUAUGGGAACCA [8] tRNA-Glu-TTC-9 -UCCCAUAUGGUCUAGC--GGUU-AGGAUUCCUGGUUUUCACCCAGGCGG-CCCGGGUUCGACUCCCGUUAUGGGAACCA [9] tRNA-Glu-TTC-10 -UCCCAUAUGGUCUAGC--GGUU-AGGAUUCCUGGUUUUCACCCAGGCGG-CCCUGGUUCGACUCCCGGUAUGGGAACCA [10] tRNA-Glu-TTC-11 -UCCCAUAUGGUCUAGC--GGUU-AGGAUUUCUGGUUUUCACCCAGGCGG-CCCGGGUUCGACUCCCGGUAUGGUAACCA [11] tRNA-Glu-TTC-13 -UCCCAUAUGGUCUAGC--GGUU-AGGAUUCCUGGUUUUCUCUCAGGCGG-CCCGGGUUCGACUCCCGGUAUGGGAACCA [12] tRNA-Glu-TTC-14 -UCCCAUAUGGUCUAGC--GGUU-AGGAUUCCUGGUUUUCACCCAGGCAG-CCCGGGUUCGACUGCCGGUAUGGGAACCA [13] tRNA-Glu-TTC-15 -UCCCAUAUGGUCUAGC--GCUU-AGGAUUCCUGGUUUUCACCCAGUUGG-CCCGGGUUCGACUCCCGGUAUGGGAACCA [14] 5022 .UCCCAUAUGGUCUAGC............................................................... [1,3,5,6,7,8,9,10,11,12,13,14] 3011 ..........................................................UCGACUCCCGGUAUGGGAACCA [1,2,3,4,5,7,10,12,14] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 3: 5002,3009 tDR Location tRNA-Leu-TAA-2:A_DS tRNA-Leu-TAA-3:A_DS tRNA-Leu-TAA-4:A_DS_TLE_Z tRNA-Leu-TAA-5:A_DS_TLE_Z tRNA-Leu-TAA-6:A_DS_TLE_Z tRNA-Leu-TAA-7:A_DS_TLE_Z tRNA-Leu-TAA-8:A_DS_TLE_Z tRNA-Leu-TAA-9:A_DS_TLE_Z tRNA-Leu-TAA-10:A_DS tRNA-Leu-TAA-11:A_DS_TLE_Z tRNA-Leu-TAA-12:A_DS_TLE_Z tRNA-Leu-TAA-13:A_DS_TLE_Z tRNA-Leu-TAA-14:TLE_Z tRNA-Leu-TAA-15:A_DS_TLE_Z tRNA-Leu-TAA-16:A_DS tRNA-Leu-TAA-17:A_DS_TLE_Z tRNA-Leu-TAA-18:A_DS_TLE_Z tRNA-Leu-TAA-19:A_DS_TLE_Z tRNA-Leu-TAA-21:TLE_Z tRNA-Leu-TAA-22:A_DS tRNA-Leu-TAA-24:A_DS_TLE_Z tRNA-Leu-TAA-27:TLE_Z tRNA-Leu-TAA-28:A_DS tRNA-Leu-TAA-29:TLE_Z tRNA-Leu-TAA-30:A_DS_TLE_Z tRNA-Leu-TAA-31:A_DS_TLE_Z tRX-Leu-NNN-5:TLE_Z tDR Isotype(s) Leu tDR Alignment # STOCKHOLM 1.0 tRX-Leu-NNN-5 -ACAC.GGAUGGCUGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCAAACCCCACUCCUGGUACCA [1] tRNA-Leu-TAA-2 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCGAACCCCACUUCUGGUACCA [2] tRNA-Leu-TAA-3 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCGAACCCCACUUCUGGUACCA [3] tRNA-Leu-TAA-4 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCGAACCCCACUCCUGGUACCA [4] tRNA-Leu-TAA-5 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCGAACCCCACUCCUGGUACCA [5] tRNA-Leu-TAA-6 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCGAACCCCACUCCUGGUACCA [6] tRNA-Leu-TAA-7 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCAAACCCCACUCCUGGUACCA [7] tRNA-Leu-TAA-8 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCGAACCCCACUCCUGGUACCA [8] tRNA-Leu-TAA-9 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-A-CGUGGGUUCGAACCCCACUCCUGGUACCA [9] tRNA-Leu-TAA-10 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCGAGCCCCACUCCUGGUACCA [10] tRNA-Leu-TAA-11 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCAAACCCCACUCCUGGUACCA [11] tRNA-Leu-TAA-12 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGGUCCAAU-G-CGUGGGUUCAAACCCCACUCCUGGUACCA [12] tRNA-Leu-TAA-13 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCCAACCCCACUCCUGGUACCA [13] tRNA-Leu-TAA-14 -ACCA.GGAUGGCUGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCAAACCCCACUCCUGGUACCA [14] tRNA-Leu-TAA-15 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.GCUUAAGAUCCAAU-G-CGUGGGUUCAAACCCCACUCCUGGUACCA [15] tRNA-Leu-TAA-16 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-A-CGUGGGUUUGAACCCCACUUCUGGUACCA [16] tRNA-Leu-TAA-17 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-A-CGUGGGUUCCAACCCCACUCCUGGUACCA [17] tRNA-Leu-TAA-18 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.GCUUAAGAUCCAAU-G-CGUGGGUUCGAACCCCACUCCUGGUACCA [18] tRNA-Leu-TAA-19 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCCGACCCCACUCCUGGUACCA [19] tRNA-Leu-TAA-21 -GCCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-UGUGGGUUUGAACCCCACUCCUGGUACCA [20] tRNA-Leu-TAA-22 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCCAACCCCACUCCUGUUACCA [21] tRNA-Leu-TAA-24 -ACCA.GGAUGGCCGAGU--GGUU-AAGGCGUUGG.GCUUAAGAUCCAAU-G-CGUGGGUUCCGACCCCACUCCUGGUACCA [22] tRNA-Leu-TAA-27 -ACCA.GGAUGGCUGAGU--GGUU-AAGCCAUUGG.ACUUAAGAUCCAAU-A-CGUGGGUUUGAACCCCACUCCUGGUACCA [23] tRNA-Leu-TAA-28 -ACCA.GGAUGGCCGAGU--GGUU-GAAGCGUUGG.AUUUAAGAUCCAAU-G-CGUGGGUUUGAACCCCACUCCUGGUUCCA [24] tRNA-Leu-TAA-29 -ACUAuGUAUGGCCGAGU--GGUU-AAGGCGUUGG.ACUUAAGAUCCAAU-G-CGUGGGUUCAAACCCCACUCCUGGUACCA [25] tRNA-Leu-TAA-30 -ACCA.GGAUGGCCGAGU--GGUA-AAGGUGUUGGgGCUUAAGAUCCAAU-G-CGUGGGUUCAAACCCCACUCCUGGUACCA [26] tRNA-Leu-TAA-31 -ACCA.GGAUGGCCGAGU--GGUC-AAGACGUUGG.ACCUAAGAUCCAAU-G-CGUGUGUUCGAACCCCACUCCUGGUACCA [27] 5002 .ACCA.GGAUGGCCG................................................................... [2,3,4,5,6,7,8,9,10,11,12,13,15,16,17,18,19,21,22,24,26,27] 3009 ................................................................ACCCCACUCCUGGUACCA [1,4,5,6,7,8,9,11,12,13,14,15,17,18,19,20,22,23,25,26,27] #=GC SS_cons :((((.(((,,<<<<___________>>>>,<<<<.<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +====.===++====+++++++++++====+====.=++***++=====+++++=====+++++++============++++ // tDR Group 4: 3010,5007 tDR Location tRNA-Ser-GCT-1:TLE_Z tRNA-Ser-GCT-2:A_DSLE_TLE_Z tRNA-Ser-GCT-4:A_DSLE_TLE_Z tRNA-Ser-GCT-5:A_DSLE tRNA-Ser-GCT-6:A_DSLE_TLE_Z tRNA-Ser-GCT-7:A_DSLE tRNA-Ser-GCT-8:TLE_Z tRNA-Ser-GCT-9:A_DSLE_TLE_Z tRNA-Ser-GCT-10:TLE_Z tRNA-Ser-GCT-11:A_DSLE tRNA-Ser-GCT-12:TLE_Z tRNA-Ser-GCT-13:A_DSLE tRNA-Ser-GCT-14:TLE_Z tRNA-Ser-GCT-15:TLE_Z tRNA-Ser-GCT-16:A_DSLE_TLE_Z tRNA-Ser-GCT-17:A_DSLE_TLE_Z tRNA-Ser-GCT-18:A_DSLE tRNA-Ser-GCT-19:A_DSLE tRNA-Ser-GCT-20:A_DSLE tRNA-Ser-GCT-22:A_DSLE_TLE_Z tRNA-Ser-GCT-23:A_DSLE_TLE_Z tRNA-Ser-GCT-24:A_DSLE_TLE_Z tRNA-Ser-GCT-25:A_DSLE_TLE_Z tRNA-Ser-GCT-26:TLE_Z tRNA-Ser-GCT-27:TLE_Z tRNA-Ser-GCT-28:TLE_Z tRNA-Ser-GCT-29:TLE_Z tRNA-Ser-GCT-30:A_DSLE tRNA-Ser-GCT-32:A_DSLE tRNA-Ser-GCT-33:A_DSLE tRNA-Ser-GCT-34:A_DSLE_TLE_Z tRNA-Ser-GCT-35:TLE_Z tRNA-Ser-GCT-36:A_DSLE_TLE_Z tRNA-Ser-GCT-37:A_DSLE tRNA-Ser-GCT-41:TLE_Z tRNA-Ser-GCT-43:TLE_Z tRNA-Ser-GCT-46:TLE_Z tRNA-Ser-GCT-47:A_DSLE tDR Isotype(s) Ser tDR Alignment # STOCKHOLM 1.0 tRNA-Ser-GCT-1 -GGCGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [1] tRNA-Ser-GCT-2 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [2] tRNA-Ser-GCT-4 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCAAAUCCCAUCCUCGUCGCCA [3] tRNA-Ser-GCT-5 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUUGUCGCCA [4] tRNA-Ser-GCT-6 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [5] tRNA-Ser-GCT-7 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCGUCCUCGUCGCCA [6] tRNA-Ser-GCT-8 -GACAAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [7] tRNA-Ser-GCT-9 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUUGAAUCCCAUCCUCGUCGCCA [8] tRNA-Ser-GCT-10 -GACGAGGUGGCCAAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [9] tRNA-Ser-GCT-11 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUUGUCGCCA [10] tRNA-Ser-GCT-12 -GACGAGGUUGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [11] tRNA-Ser-GCT-13 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUUCCAUCCUCGUCGCCA [12] tRNA-Ser-GCT-14 -GACGUGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [13] tRNA-Ser-GCT-15 -GGCGAGGUGGCCGAGU--GGUU-AAGGCGAUGGGCUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [14] tRNA-Ser-GCT-16 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CAUGGGUUCGAAUCCCAUCCUCGUCGCCA [15] tRNA-Ser-GCT-17 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCUAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [16] tRNA-Ser-GCT-18 -GACGAGGUGGCCGAGU--GGUU-AAGGCAAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUUGUCGCCA [17] tRNA-Ser-GCT-19 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCAUCGCCA [18] tRNA-Ser-GCT-20 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUUGAAUCCCAUCCUUGUCGCCA [19] tRNA-Ser-GCT-22 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-A-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [20] tRNA-Ser-GCT-23 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUUGAAUCCCAUCCUCGUCGCCA [21] tRNA-Ser-GCT-24 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [22] tRNA-Ser-GCT-25 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUUGAGCGUGGGUUCGAAUCCCAUCCUCGUCGCCA [23] tRNA-Ser-GCT-26 -GACGAGGUUGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCCAAUCCCAUCCUCGUCGCCA [24] tRNA-Ser-GCT-27 -AACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCCAAUCCCAUCCUCGUCGCCA [25] tRNA-Ser-GCT-28 -GACGAGGUGGCCGAGG--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCCAAUCCCAUCCUCGUCGCCA [26] tRNA-Ser-GCT-29 -GACGAGGUGGCCGAGU--GCUU-AAGGCGAUGGACUGCUAAUCCGUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [27] tRNA-Ser-GCT-30 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-UGUGGCUUUGAAUCCCAUCCUUGUCGCCA [28] tRNA-Ser-GCT-32 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-UGUGGGUUCCAAUCCCAUCCUCAUCGCCA [29] tRNA-Ser-GCT-33 -GACGAGGUGGCCGAGU--GGUU-AAGAUGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCAAAUCUCAUCCUUGUCGCCA [30] tRNA-Ser-GCT-34 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUUAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [31] tRNA-Ser-GCT-35 -GACAAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUUAUUCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [32] tRNA-Ser-GCT-36 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-CGUGGGUUCGAAUCCCAUCCUCGUCGCCA [33] tRNA-Ser-GCT-37 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUUGAGCGUGGGGUCGAAUCCCAUCCUUGUCGCCA [34] tRNA-Ser-GCT-41 -GAUGAAGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUAAUCCAUU-G-UGUGGGUUCGUAUCCCAUCCUCGUCGCCA [35] tRNA-Ser-GCT-43 -GACGUGGUGGCCGAGU--GGUU-AAGGCGAUGGACUGCUUAUCCAUU-G-CUUGGGUUCGAAUCCCAUCCUCGUCGCCA [36] tRNA-Ser-GCT-46 -GAUGAAGUGGCCGAGU--GGUU-AAGGCAAUGGACUGCUAAUCCAUU-G-UGUGGGUUCGUAUCCCAUCCUCGUCGCCA [37] tRNA-Ser-GCT-47 -GACGAGGUGGCCGAGU--GGUU-AAGGCGAUGGACAGCUAAUCCAGU-G-UGUGGGUUUGAAUCCCAUCCUUGUCGCCA [38] 5007 .GACGAGGUGGCCGAGU--GGUU-AAG..................................................... [2,3,4,5,6,8,10,12,15,16,17,18,19,20,21,22,23,28,29,30,31,33,34,38] 3010 ..............................................................AUCCCAUCCUCGUCGCCA [1,2,3,5,7,8,9,11,13,14,15,16,20,21,22,23,24,25,26,27,31,32,33,35,36,37] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 5: 3001,5016 tDR Location tRNA-Gln-CTG-1:A_DSLE tRNA-Gln-CTG-2:A_DSLE_TE_Z tRNA-Gln-CTG-3:A_DSLE_TE_Z tRNA-Gln-CTG-4:A_DSLE tRNA-Gln-CTG-5:TE_Z tRNA-Gln-CTG-6:A_DSLE tRNA-Gln-CTG-7:TE_Z tRNA-Gln-TTG-1:A_DSLE_TE_Z tRNA-Gln-TTG-2:TE_Z tRNA-Gln-TTG-3:A_DSLE_TE_Z tRNA-Gln-TTG-4:A_DSLE tRNA-Gln-TTG-5:A_DSLE tRNA-Gln-TTG-6:TE_Z tRNA-Gln-TTG-7:TE_Z tRNA-Gln-TTG-8:TE_Z tDR Isotype(s) Gln tDR Alignment # STOCKHOLM 1.0 tRNA-Gln-CTG-1 -GGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGGACCUCCA [1] tRNA-Gln-CTG-2 -GGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUCCA [2] tRNA-Gln-CTG-3 -GGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-ACCGAGUUCAAAUCUCGGUGGAACCUCCA [3] tRNA-Gln-CTG-4 -GGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACUUCCA [4] tRNA-Gln-CTG-5 -UGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUCCA [5] tRNA-Gln-CTG-6 -GGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGUUGGAACCUCCA [6] tRNA-Gln-CTG-7 -GGUUACAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUCCA [7] tRNA-Gln-TTG-1 -GGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUUUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUCCA [8] tRNA-Gln-TTG-2 -GGUUCCAUGGUGUAAC--GGUU-AGCACUCUGGACUUUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUCCA [9] tRNA-Gln-TTG-3 -GGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUUUGAGUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUCCA [10] tRNA-Gln-TTG-4 -GGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUUUGAAUCCAGCGA-UCCGAGUUCAAAUCUCAGUGGAACCUCCA [11] tRNA-Gln-TTG-5 -GGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUUUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGAUGGAACCUCCA [12] tRNA-Gln-TTG-6 -GUUUCUAUGGUGUAAU--GGUU-AGCACUCUGGACUUUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUCCA [13] tRNA-Gln-TTG-7 -GGUUCCAUGGUGUAAC--GGUU-AGCACUCUGGGCUUUGAAUCCAGCGA-UCUGAGUUCAAAUCUCGGUGGAACCUCCA [14] tRNA-Gln-TTG-8 -GGUUCCACGGUGUAAU--GCUU-AGCACUCUGGACUUUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUCCA [15] 5016 .GGUUCCAUGGUGUAAU--GGUU-AGC..................................................... [1,2,3,4,6,8,10,11,12] 3001 ................................................................CUCGGUGGAACCUCCA [2,3,5,7,8,9,10,13,14,15] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 6: 3014,5005,5004 tDR Location tRNA-Tyr-GTA-1:A_DSLE_CSL_TE_Z tRNA-Tyr-GTA-2:A_DSLE_CSL_TE_Z tRNA-Tyr-GTA-3:A_DSLE_CSL_TE_Z tRNA-Tyr-GTA-4:A_DSLE_CSL tRNA-Tyr-GTA-5:A_DSLE_CSL tRNA-Tyr-GTA-7:TE_Z tRNA-Tyr-GTA-8:TE_Z tRNA-Tyr-GTA-10:A_DSLE_CSL_TE_Z tRNA-Tyr-GTA-11:A_DSLE_CSL tRNA-Tyr-GTA-13:A_DSLE_CSL_TE_Z tRNA-Tyr-GTA-14:A_DSLE_CSL tRNA-Tyr-GTA-15:TE_Z tRNA-Tyr-GTA-16:A_DSLE_CSL_TE_Z tRNA-Tyr-GTA-20:TE_Z tRNA-Tyr-GTA-21:TE_Z tRNA-Tyr-GTA-22:TE_Z tRNA-Tyr-GTA-23:TE_Z tRNA-Tyr-GTA-24:A_DSLE_CSL_TE_Z tRNA-Tyr-GTA-27:A_DSLE_CSL_TE_Z tRNA-Tyr-GTA-28:TE_Z tRNA-Tyr-GTA-29:TE_Z tRNA-Tyr-GTA-31:A_DSLE_CSL tRX-Tyr-NNN-2:A_DSLE_CSL_TE_Z tDR Isotype(s) Tyr tDR Alignment # STOCKHOLM 1.0 tRNA-Tyr-GTA-1 -CCUUCGAUAGCUCAGUU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCGCUGGUUCGACUCCGGCUCGAAGGACCA [1] tRNA-Tyr-GTA-2 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCGCUGGUUCGAUUCCGGCUCGAAGGACCA [2] tRNA-Tyr-GTA-3 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCGCUGGUUCAAUUCCGGCUCGAAGGACCA [3] tRNA-Tyr-GTA-4 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCGCUGGUUCGAUUCCAGCUCGAAGGACCA [4] tRNA-Tyr-GTA-5 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCACUGGUUCGAUUCCGGUUCGAAGGACCA [5] tRNA-Tyr-GTA-7 -CCUUCGAUAGCUCAGCU-GGU--AGAGUGGAGGACUGUAGAUCCUUAGGUCGCUGGUUCGAUUCCGGCUCGAAGGACCA [6] tRNA-Tyr-GTA-8 -CCUUCGAUAGCUCAGCC-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCGCUGGUUCGAUUCCGGCUCGAAGGACCA [7] tRNA-Tyr-GTA-10 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUUGCUGGUUCAAUUCCGGCUCGAAGGACCA [8] tRNA-Tyr-GTA-11 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCGCUGGUUCAAUUCUGGCUCGAAGGACCA [9] tRNA-Tyr-GTA-13 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGACCCUUAGGUCGCUGGUUCGAUUCCGGCUCGAAGGACCA [10] tRNA-Tyr-GTA-14 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCGCUGGUUCGAUUCCGGCUCGUAGGACCA [11] tRNA-Tyr-GTA-15 -CCUUCCAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCGCUGGUUCAAUUCCGGCUCGAAGGACCA [12] tRNA-Tyr-GTA-16 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCGCUUGUUCAAUUCCGGCUCGAAGGACCA [13] tRNA-Tyr-GTA-20 -CCUUCGAUAGCUCAGCU-GGG--AGAGUGGAGGACUGUAGAUCCUUAGGUCGCUGGUUCGAUUCCGGCUCGAAGGACCA [14] tRNA-Tyr-GTA-21 -CCUUCGAUAGCUCAGCC-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCUCUGGUUCGAUUCCGGCUCGAAGGACCA [15] tRNA-Tyr-GTA-22 -CCUUCCAUAGCUCAGCU-GGU--AGAGUGGAGGACUGUAGAUCCUUAGGUCGCUGGUUCAAUUCCGGCUCGAAGGACCA [16] tRNA-Tyr-GTA-23 -CCUUCCAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUUGCUGGUUCAAUUCCGGCUCGAAGGACCA [17] tRNA-Tyr-GTA-24 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAACCUUAGGUCGCUGGUUUGAUUCCGGCUCGAAGGACCA [18] tRNA-Tyr-GTA-27 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCGUUAAGUCGCUGGUUCAAUUCCGGCUCGAAGGACCA [19] tRNA-Tyr-GTA-28 -CCUUCCAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUCCUUAGGUCGCUAGUUCAAUUCCGGCUCGAAGGACCA [20] tRNA-Tyr-GTA-29 -CCUUCGAUAGCUCAGCU-GGU--AGAGUGGAGGACUGUAGAUCUUUAGGUUGCUGGUUCAAUUCCGGCUCGAAGGACCA [21] tRNA-Tyr-GTA-31 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGGUACUUAGGUUGCUGGUUCGAUUCCAGCUCGAAGGACCA [22] tRX-Tyr-NNN-2 -CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACUGUAGAUUGGUAAGUCGCUGGUUCAAUUCCGGCUCGAAGGACCA [23] 5005 .CCUUCGAUAGCUCAGUU-GGU--AGAGCGGAGGACU........................................... [1] 5004 .CCUUCGAUAGCUCAGCU-GGU--AGAGCGGAGGACU........................................... [2,3,4,5,8,9,10,11,13,18,19,22,23] 3014 ...............................................................UCCGGCUCGAAGGACCA [1,2,3,6,7,8,10,12,13,14,15,16,17,18,19,20,21,23] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 7: 5010,5009 tDR Location tRNA-Gly-GCC-1:A_DSLE tRNA-Gly-GCC-2:A_DSLE tRNA-Gly-GCC-3:A_DSLE tRNA-Gly-GCC-4:A_DSLE tRNA-Gly-GCC-6:A_DSLE tRNA-Gly-GCC-7:A_DSL tRNA-Gly-GCC-8:A_DSLE tRNA-Gly-GCC-9:A_DSLE tRNA-Gly-GCC-10:A_DSLE tRNA-Gly-GCC-12:A_DSLE tRNA-Gly-GCC-13:A_DSLE tRNA-Gly-GCC-14:A_DSLE tRNA-Gly-GCC-15:A_DSLE tRNA-Gly-TCC-1:A_DSL tDR Isotype(s) Gly tDR Alignment # STOCKHOLM 1.0 tRNA-Gly-GCC-1 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCA [1] tRNA-Gly-GCC-2 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGUGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCA [2] tRNA-Gly-GCC-3 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGGGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCA [3] tRNA-Gly-GCC-4 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCAAUUCCCGGCCAAUGCACCA [4] tRNA-Gly-GCC-6 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGCGG-CCUGGGUUCGAUUCCCGGCCAAUGCACCA [5] tRNA-Gly-GCC-7 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCACCUGCCAUGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCA [6] tRNA-Gly-GCC-8 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCACCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCA [7] tRNA-Gly-GCC-9 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCAGCCAAUGCACCA [8] tRNA-Gly-GCC-10 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUUCCGGCCAAUGCACCA [9] tRNA-Gly-GCC-12 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGGCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCA [10] tRNA-Gly-GCC-13 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCUGCCAAUGCACCA [11] tRNA-Gly-GCC-14 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGGGG-CCCGGAUUCGAUUCCCGGCCAAUGCACCA [12] tRNA-Gly-GCC-15 -GCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCUGGGUUCGAUUCCUGGCCAAUGCACCA [13] tRNA-Gly-TCC-1 -GCAUUGGUGGUUCAGU--GGU--CGAAUUCUCGCCUUCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCA [14] 5010 .GCAUUGGUGGUUCAGU--GGU.......................................................... [1,2,3,4,5,6,9,11,12,14] 5009 .GCAUUGGUGGUUCAGU--GGU--AGA..................................................... [1,2,3,4,5,7,8,9,10,11,12,13] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 8: 5003 tDR Location tRNA-iMet-CAT-1:A_DSL tRNA-iMet-CAT-3:A_DSL tRNA-iMet-CAT-6:A_DSL tRNA-iMet-CAT-8:A_DSL tRNA-iMet-CAT-9:A_DSL tRNA-iMet-CAT-10:A_DSL tRNA-iMet-CAT-11:A_DSL tRNA-iMet-CAT-13:A_DSL tDR Isotype(s) iMet tDR Alignment # STOCKHOLM 1.0 tRNA-iMet-CAT-1 -AGCAGAGUGGCGCAGC--GGA--AGCGUGCUGGGCCCAUAACCCAGAGGUCGAUGGAUCGAAACCAUCCUCUGCUACCA [1] tRNA-iMet-CAT-3 -AGCAGAGUGGCGCAGC--GGA--AGCGUGCUGGGCCCAUAACCCAGAGGUCAAUGGAUCGAAACCAUCCUCUGCUACCA [2] tRNA-iMet-CAT-6 -AGCAGAGUGGCGCAGC--GGA--AGCGUGCUGGGCCCAUAACCCAGAGGUCGAUGGAUCGAAACCAUCUUCUGCUACCA [3] tRNA-iMet-CAT-8 -AGCAGAGUGGCGCAGC--GGA--AGCGUGCUGGGCCCAUAACCCAGAGGUCGAUGGAUCAAAACCAUUCUCUGCUACCA [4] tRNA-iMet-CAT-9 -AGCAGAGUGGCGCAGC--GGA--AGCGUGCUGGGCCCAUAACCCAGAGGUCGAUGGUUCGAAACCAUCCUCUGCUACCA [5] tRNA-iMet-CAT-10 -AGCAGAGUGGCGCAGC--GGA--AGCGUGCUGGGCCCAUAACCCAGAGGUCGAUGGAUCGAAACCAUCCUCUACUACCA [6] tRNA-iMet-CAT-11 -AGCAGAGUGGCGCAGC--GGA--AGCGUGCUGGGCCCAUAACACAGAGGUCGAUGGAUCGAAACCAUCCUCUGCUACCA [7] tRNA-iMet-CAT-13 -AGCAGAGUGGCGCAGC--GGA--AGCGUGUUGGGCCCAUAACCCAGAGGUCGAUGGAUUGAAACCAUCCUCUGCUACCA [8] 5003 .AGCAGAGUGGCGCAGC--G............................................................ [1,2,3,4,5,6,7,8] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 9: 5006 tDR Location tRNA-Arg-TCG-4:A_DSL tRNA-Arg-TCG-6:A_DSL tRNA-Arg-TCG-8:A_DSL tDR Isotype(s) Arg tDR Alignment # STOCKHOLM 1.0 tRNA-Arg-TCG-4 -GACCGCGUGGCCUAAU--GGAU-AAGGCGUCUGACUUCGGAUCAGAAGAUUGAGGGUUCGAGUCCCUUCGUGGUCGCCA [1] tRNA-Arg-TCG-6 -GACCGCGUGGCCUAAU--GGAU-AAGGCGUCUGACUUCGGAACAGAAGAUUGAGGGUUCGAGUCCCUUCGUGGUCGCCA [2] tRNA-Arg-TCG-8 -GACCGCGUGGCCUAAU--GGAU-AAGACGUCUGACUUCGGAUCAGAAGAUUGAGGGUUCGAGUCCCUUCGUGGUCGCCA [3] 5006 .GACCGCGUGGCCUAAU--GG........................................................... [1,2,3] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 10: 5011 tDR Location tRNA-Lys-CTT-1:A_DSLE_CS tRNA-Lys-CTT-5:A_DSLE_CS tRNA-Lys-CTT-9:A_DSLE_CS tRNA-Lys-CTT-13:A_DSLE_CS tRNA-Lys-CTT-14:A_DSLE_CS tRNA-Lys-CTT-15:A_DSLE_CS tRNA-Lys-CTT-17:A_DSLE_CS tDR Isotype(s) Lys tDR Alignment # STOCKHOLM 1.0 tRNA-Lys-CTT-1 -GCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGCCA [1] tRNA-Lys-CTT-5 -GCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCAAGCCCCACGUUGGGCGCCA [2] tRNA-Lys-CTT-9 -GCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCAUGGGUUCGAGCCCCACGUUGGGCGCCA [3] tRNA-Lys-CTT-13 -GCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGCUCGAGCCCCACGUUGGGCGCCA [4] tRNA-Lys-CTT-14 -GCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCACACGUUGGGCGCCA [5] tRNA-Lys-CTT-15 -GCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUAGGUUCGAGCCCCACGUUGGGCGCCA [6] tRNA-Lys-CTT-17 -GCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUCGGCGCCA [7] 5011 .GCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGA............................................. [1,2,3,4,5,6,7] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 11: 5012 tDR Location tRNA-His-GTG-1:A_DSLE tRNA-His-GTG-3:A_DSLE tRNA-His-GTG-4:A_DSLE tRNA-His-GTG-5:A_DSLE tRNA-His-GTG-6:A_DSLE tRNA-His-GTG-7:A_DSLE tRNA-His-GTG-8:A_DSLE tRNA-His-GTG-9:A_DSLE tRNA-His-GTG-11:A_DSLE tRNA-His-GTG-12:A_DSLE tRNA-His-GTG-13:A_DSLE tDR Isotype(s) His tDR Alignment # STOCKHOLM 1.0 tRNA-His-GTG-1 GGCCGUGAUCGUAUAGU--GGUU-AGUACUCUGCGUUGUGGCCGCAGCAA-CCCCGGUUCGAAUCCGGGUCACGGCACCA [1] tRNA-His-GTG-3 GGCCGUGAUCGUAUAGU--GGUU-AGUACUCUGCGUUGUGGCCGCAGCAA-CCUCGGUUCGAAUCCGAGUCACGGCACCA [2] tRNA-His-GTG-4 GGCCGUGAUCGUAUAGU--GGUU-AGUACUCUGCGUUGUGGCCGCAGCAA-CCCCGGUUCAAAUCCGGGUCACGGCACCA [3] tRNA-His-GTG-5 GGCCGUGAUCGUAUAGU--GGUU-AGUACUCUGCGUUGUGGCCGCAGCAA-CCCUGGUUCGAAUCCGGGUCACGGCACCA [4] tRNA-His-GTG-6 GGCCGUGAUCGUAUAGU--GGUU-AGUACUCUGCGUUGUGGCUGCAGCAA-CCCCGGUUCGAAUCCGGGUCACGGCACCA [5] tRNA-His-GTG-7 GGCCGUGAUCGUAUAGU--GGUU-AGUACUCUGUGUUGUGGCCGCAGCAA-CCCCGGUUCGAAUCCGGGUCACGGCACCA [6] tRNA-His-GTG-8 GGCCGUGAUCGUAUAGU--GGUU-AGUACUCUGCGUUGUGGCCGCAGCAA-CCCCGGUUUGAAUCCGGGUCACGGCACCA [7] tRNA-His-GTG-9 GGCCGUGAUCGUAUAGU--GGUU-AGUACUCUGCGUUGUGGCCGCAGCAA-CCCCGGUUCGAAUCCGGGUCACUGCACCA [8] tRNA-His-GTG-11 GGCCGUGAUCGUAUAGU--GGUU-AGUACUCUGCGUUGUGGCCGCAGCAA-CCCCGGUUCGAAUCCGAGUCACGGCACCA [9] tRNA-His-GTG-12 GGCCGUGAUCGUAUAGU--GGUU-AGUACUCUGCGUUGUGGCCGCAGCAA-CCACGGUUCGAAUCCGCGUCACGGCACCA [10] tRNA-His-GTG-13 GGCCGUGAUCGUAUAGU--GGUU-AGUACUCUGAGUUGUGGCCGCAGCAA-CCCCGGUUCGAAUCCGGGUCACGGCACCA [11] 5012 .GCCGUGAUCGUAUAGU--GGUU-AG...................................................... [1,2,3,4,5,6,7,8,9,10,11] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 12: 5013 tDR Location tRNA-Arg-TCG-10:A_DSL tRNA-Gly-TCC-2:A_DSL tRNA-Gly-TCC-4:A_DSL tRNA-Gly-TCC-5:A_DSL tRNA-Gly-TCC-7:A_DSL tRNA-Gly-TCC-8:A_DSL tRNA-Gly-TCC-9:A_DSL tRNA-Gly-TCC-10:A_DSL tRNA-Gly-TCC-11:A_DSL tRNA-Gly-TCC-12:A_DSL tRNA-Gly-TCC-13:A_DSL tRNA-Gly-TCC-14:A_DSL tRNA-Gly-TCC-17:A_DSL tRNA-Gly-TCC-19:A_DSL tDR Isotype(s) Gly,Arg tDR Alignment # STOCKHOLM 1.0 tRNA-Arg-TCG-10 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAACUGCUUUCGAAGCAGUUGA-CCCGGGUUCGAUUCCCGGCCAACG..CACCA [1] tRNA-Gly-TCC-2 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CCCGGGUUCGAUUCCCGGCCAACG..CACCA [2] tRNA-Gly-TCC-4 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CCCGGGUUCGAUUCCCGGCCAAUG..CACCA [3] tRNA-Gly-TCC-5 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CCCGGGUUUGAUUCCCGGCCAACG..CACCA [4] tRNA-Gly-TCC-7 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CCCGGGUUCGAUUCCCGGCCAACA..CACCA [5] tRNA-Gly-TCC-8 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CCCGGGUUCGAUUCCCAGCCAACG..CACCA [6] tRNA-Gly-TCC-9 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CCCGGGUUAGAUUCCCGGCCAACG..CACCA [7] tRNA-Gly-TCC-10 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CCCGGGUUCCAUUCCCGGCCAACG..CACCA [8] tRNA-Gly-TCC-11 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CCCGGGUUCGAUUCCCGGGCAACG..CACCA [9] tRNA-Gly-TCC-12 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCUUUCCAAGCAGUUGA-CCCGGGUUCGAUUCCCGGGCAACG..CACCA [10] tRNA-Gly-TCC-13 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CCCGCGUUCGAUUCCCGGCCAACG..CACCA [11] tRNA-Gly-TCC-14 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CCCGGGUUCAAUUCCCAGCCAACG..CACCA [12] tRNA-Gly-TCC-17 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CUCGGGUUCCAUUCCCGGCCAACG..CACCA [13] tRNA-Gly-TCC-19 -GCGUUGGUGGUAUAGU--GGUG-AGCAUAGCUGCCUUCCAAGCAGUUGA-CCCGGGUUCGAUUACCGGCCAACGgaCACCA [14] 5013 .GCGUUGGUGGUAUAGU--GGUG-A......................................................... [1,2,3,4,5,6,7,8,9,10,11,12,13,14] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))..):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++===========..=++++ // tDR Group 13: 3006,5014 tDR Location tRNA-Ala-CGC-1:A_DSLE tRNA-Ala-CGC-2:A_DSLE tRNA-Ala-CGC-3:A_DSLE tRNA-Ala-CGC-5:A_DSLE tRNA-Ala-CGC-7:A_DSLE tRNA-Ala-CGC-8:A_DSLE tRNA-Ala-CGC-10:A_DSLE tRNA-Ala-CGC-11:A_DSLE tRNA-Ala-CGC-16:A_DSLE tRNA-Ala-TGC-1:A_DSLE tRNA-Ala-TGC-2:A_DSLE tRNA-Ala-TGC-4:A_DSLE tRNA-Ala-TGC-6:A_DSLE tRNA-Ala-TGC-7:A_DSLE tRNA-Ala-TGC-9:A_DSLE tRNA-Ala-TGC-10:A_DSLE tRNA-Ala-TGC-11:A_DSLE tRNA-Ala-TGC-12:A_DSLE tRNA-Ala-TGC-13:A_DSLE tRNA-Ala-TGC-15:A_DSLE tRNA-Ala-TGC-16:A_DSLE tRNA-Ala-TGC-17:A_DSLE tRNA-Glu-TTC-16:A_DSLE tRNA-Glu-TTC-17:A_DSLE tDR Isotype(s) Glu,Ala tDR Alignment # STOCKHOLM 1.0 tRNA-Ala-CGC-1 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUCGCAUGUAUGAGGCCCCGGGUUCGAUCCCCGGCAUCUCCACCA [1] tRNA-Ala-CGC-2 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUCGCAUGUAUGAGGCCCCGGGUUCAAUCCCCGGCAUCUCCACCA [2] tRNA-Ala-CGC-3 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCACGCUUCGCAUGUGUGAGGCCCCGGGUUCAAUCCCCGGCAUCUCCACCA [3] tRNA-Ala-CGC-5 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUCGCAUGUAUGAGGUCCUGGGUUCAACCCCCAGCAUCUCCACCA [4] tRNA-Ala-CGC-7 -GGGGAUGUAGCUCAGU--GGU--AGAGUGCAUGCUUCGCAUGUAUGAGGCCCCGGGUUCAACCCCCGGCAUCUCCACCA [5] tRNA-Ala-CGC-8 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUCGCAUGUAUGGGGCCCCGGGUUCAAUCCCCGGCAUCUCCACCA [6] tRNA-Ala-CGC-10 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUCGCAUAUAUGAGGCCCCGGGUUCAAUCCCCGGCAUCUCCACCA [7] tRNA-Ala-CGC-11 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUCGCAUGUAUGAGGCCCCGGGUUCAAUCCCCGGCAUCUACACCA [8] tRNA-Ala-CGC-16 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUCGCAUGUAUGAGGCCCCGGGUUCAAUCUCCAGCAUCUCCACCA [9] tRNA-Ala-TGC-1 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGCCCCGGGUUCAAUCCCCGGCAUCUCCACCA [10] tRNA-Ala-TGC-2 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGGUUCAAUCCCCAGCAUCUCCACCA [11] tRNA-Ala-TGC-4 -GGGGAUGUAGCUCAGU--GGU--AGAGCACAUGCUUUGCAUGUAUGAGGUCUUGGGUUCAAUCCCCAGCAUCUCCACCA [12] tRNA-Ala-TGC-6 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUUUUGGGUUCAAUCCCCAGCAUCUCCACCA [13] tRNA-Ala-TGC-7 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGGUUCAAUCCCCAGCAUUUCCACCA [14] tRNA-Ala-TGC-9 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCGUUGCAUGUAUGAGGCCCCGGGUUCAAUCCCCGGCAUCUCCACCA [15] tRNA-Ala-TGC-10 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUAGGUUCAAUCCCCAGCAUCUCCACCA [16] tRNA-Ala-TGC-11 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGCCCCGGGUUCAAUCCCCAGCGUCUCCACCA [17] tRNA-Ala-TGC-12 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGCCCUGGGUUCAAUCCCCGGCAACUCCACCA [18] tRNA-Ala-TGC-13 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGGUUCAAUCACCAGCAUCUCCACCA [19] tRNA-Ala-TGC-15 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUUUUGGGUUCAAUCACCAGCAUCUCCACCA [20] tRNA-Ala-TGC-16 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCGUGUAUGAGGACCCGGGUUCAAUCCCCGCCAUCUCCCCCA [21] tRNA-Ala-TGC-17 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCGUUGCGUGUAUGAGGCCCCGGGUACAAUCCCCGCCAUCUCCCCCA [22] tRNA-Glu-TTC-16 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGUUUUUCAUGUAUGAGGCCCCGGGUUCAAUCCCCGGCAUCUCCACCA [23] tRNA-Glu-TTC-17 -GGGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUUCAUGUAUGAGGCCCUGGGUUCAAUCCCCGGCAUCUCCACCA [24] 5014 .GGGGAUGUAGCUCAGU--GGU--AGA..................................................... [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24] 3006 ..............................................................UCCCCGGCAUCUCCACCA [1,2,3,6,7,10,15,23,24] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 14: 5017 tDR Location tRNA-Ile-TAT-15:A_DSL tRNA-Val-TAC-3:A_DSL tRNA-Val-TAC-4:A_DSL tRNA-Val-TAC-5:A_DSL tRNA-Val-TAC-6:A_DSL tRNA-Val-TAC-7:A_DSL tRNA-Val-TAC-8:A_DSL tRNA-Val-TAC-9:A_DSL tRNA-Val-TAC-11:A_DSL tRNA-Val-TAC-12:A_DSL tRNA-Val-TAC-13:A_DSL tRNA-Val-TAC-14:A_DSL tRNA-Val-TAC-17:A_DSL tRNA-Val-TAC-19:A_DSL tRNA-Val-TAC-20:A_DSL tRNA-Val-TAC-21:A_DSL tDR Isotype(s) Ile,Val tDR Mismatches U:3:G:1 U:4:G:1 G:2:U:1 tDR Alignment # STOCKHOLM 1.0 tRNA-Ile-TAT-15 -GGUUU..CAUAGUGUAGU--GGUC-AUCAUGUCUGCUUUAUACGCCGAAGGCCCUGGGUUCAUUCCCCAGUGAAAGCACCA [1] tRNA-Val-TAC-3 -GGUUU..CAUAGUGUAGU--GGUU-AUCACGUCUGCUUUACACGCAGAAGGUCCUGGGUUCGAUCCCCAGUGAAACCACCA [2] tRNA-Val-TAC-4 -GGUUU..CAUAGUGUAGU--GGUU-AUCACGUCUGCUUUACACGCAGAAGGUCCUGGGUUCGAGCCCCAGUGAAACCACCA [3] tRNA-Val-TAC-5 -GGUUU..CAUAGUGUAGU--GGUU-AUCACAUCUGCUUUACACGCAGAAGGUCCUGGGUUCAAUCCCCAGUGAAACCACCA [4] tRNA-Val-TAC-6 -GGUUU..CAUAGUGUAGU--GGCU-AUCACGUCUGCUUUACACGCAGAAGGUCCUGGGUUCAAUCCCCAGUGAAACCACCA [5] tRNA-Val-TAC-7 -GGUUU..CAUAGUGUAGU--GGUC-AUCACGUCUGCUUUACACGCAGAAGGUCCUGGGUUCAAUCCCCAGUGAAACCACCA [6] tRNA-Val-TAC-8 -GGUUU..CAUAGUGUAGC--GGUU-AUCACGUCUGCUUUACACGCAGAAGGUCCUGGGUUCAAUCCCCAGUGAAACCACCA [7] tRNA-Val-TAC-9 -GGUUU..CAUAGUGUAGU--GGUC-AUCACAUCUGCUUUACACGCAGAAGGUCCUGGGUUCAAUCCCCAGUGAAACCACCA [8] tRNA-Val-TAC-11 -GGUUU..CAUAGUGUAGU--GGUU-AUCACGUCUGCUUUACACGCAGAAGGUCCUGGGUUCAAUCCCCAGUGAAACCCCCA [9] tRNA-Val-TAC-12 -GGUUU..CAUAGUGUAGU--GGUC-UUCACGUCUGCUUUACACGCAGAAGGUCCUGGGUUCAAUCCCCAGUGAAACCACCA [10] tRNA-Val-TAC-13 -GGUUU..CAUAGUGUAGU--GGUC-AUCACAUCUGCUUUACACGCAGAAGGUCCUGGGUUCAAUCCCCAGUGAAGCCACCA [11] tRNA-Val-TAC-14 -GGUUU..CAUAGUGUAGU--GGUC-AUCACGUCUGCUUUACACGCAGAAGGUCCUGGGUUCAUUCCCCAGUGAAACCACCA [12] tRNA-Val-TAC-17 -GUGGUuuCAUAGUGUAGU--GGUC-AUCACGUCUGCUUUACACGCAGAUGGUCCUGGGUUCAAUCCCCAGUGACCCCACCA [13] tRNA-Val-TAC-19 -GGUUU..CAUAGUGUAGU--GUUC-AUCACGUCUGCUUUACACGCAGAACGUCCUCGGUUCAAUCCCUAGUGAAACCACCA [14] tRNA-Val-TAC-20 -GGUUU..CAUAGUGUAUU--GGUC-AACAUGUCUUCUUUACAUGCAGAAGGUCCUGGGUUCAAUCCCCAGUGAAACCACCA [15] tRNA-Val-TAC-21 -GGUUU..CAUAGUGUAGU--GGCU-AUCACGUCUGCUUUACACACAGUAGGGCAUGGGUUCAAUCCCCAGUGAAACCACCA [16] 5017 .GGUUU..CAUAGUGUA................................................................. [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16] #=GC SS_cons :(((((..((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=====..==++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 15: 5018 tDR Location tRNA-Ser-AGA-1:A_DSL tRNA-Ser-AGA-2:A_DSL tRNA-Ser-AGA-3:A_DSL tRNA-Ser-AGA-4:A_DSL tRNA-Ser-AGA-6:A_DSL tRNA-Ser-AGA-7:A_DSL tRNA-Ser-AGA-8:A_DSL tRNA-Ser-AGA-10:A_DSL tRNA-Ser-AGA-11:A_DSL tRNA-Ser-AGA-12:A_DSL tRNA-Ser-TGA-1:A_DSL tRNA-Ser-TGA-2:A_DSL tRNA-Ser-TGA-3:A_DSL tRNA-Ser-TGA-4:A_DSL tRNA-Ser-TGA-6:A_DSL tRNA-Ser-TGA-9:A_DSL tDR Isotype(s) Ser tDR Alignment # STOCKHOLM 1.0 tRNA-Ser-AGA-1 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUAGAAAUCCAUU-G-CGCAGGUUCGAAUCCUGCCGACUACGCCA [1] tRNA-Ser-AGA-2 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUAGAAAUCCAUU-G-CGCAGGUUCGAAUCCUGCCGACUACGCCA [2] tRNA-Ser-AGA-3 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUAGAAAUCCAUU-G-CGCAGGUUCAAAUCCUGCCGACUACGCCA [3] tRNA-Ser-AGA-4 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUAGAAAUCCAUU-G-CGCAGGUUCGAAUCCUGCUGACUACGCCA [4] tRNA-Ser-AGA-6 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUAGAAAUCCAUU-G-CGCAGGUUCGAAUCCUGCCGACUACGCCA [5] tRNA-Ser-AGA-7 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUAGAAAUCCAUU-G-CGCAGGUUCGAAUACUGCCGACUACGCCA [6] tRNA-Ser-AGA-8 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUAGAAAUCCAUU-G-CGCAGGUUCGAUUCCUGCCGACUACGCCA [7] tRNA-Ser-AGA-10 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUAGAAAUCCAUUGG-CGCAGGUUCGAAUCCUGCCGACUACGCCA [8] tRNA-Ser-AGA-11 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUAGAAAUCAAUU-G-CGCAGGUUUGAAUCCUGCCGACUACGCCA [9] tRNA-Ser-AGA-12 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUAGAAAUCCAUUGAGCUUAGUUUUGAGUCCUGUCGACUACUCCA [10] tRNA-Ser-TGA-1 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUUGAAAUCCAUU-G-CGCAGGUUCGAAUCCUGCCGACUACGCCA [11] tRNA-Ser-TGA-2 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUUGAAAUCCAUU-G-CGCAGGUUCAAAUCCUGCCGACUACGCCA [12] tRNA-Ser-TGA-3 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUUGAAAUCCAUU-G-CGCAGGUUCGAAUCCUGCCGACUACGCCA [13] tRNA-Ser-TGA-4 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUUGAAAUCCAUU-A-CGCAGGUUCGAAUCCUGCCGACUACGCCA [14] tRNA-Ser-TGA-6 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUUGAAAUCCAUUGG-CGCAGGUUCGAAUCCUGCCGACUACGCCA [15] tRNA-Ser-TGA-9 -GUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUUGAAAUCCAUU-G-CGCAGGUUCGAAUCCUGCCGACUUUGCCA [16] 5018 .GUAGUCGUGGCCGAGU--GG........................................................... [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 16: 5019 tDR Location tRNA-Leu-CAA-1:A_DSL tRNA-Leu-CAA-2:A_DSL tRNA-Leu-CAA-3:A_DSL tRNA-Leu-CAA-4:A_DSL tRNA-Leu-CAA-5:A_DSL tRNA-Leu-CAA-6:A_DSL tRNA-Leu-CAA-7:A_DSL tRNA-Leu-CAA-8:A_DSL tRNA-Leu-CAG-1:A_DSL tRNA-Leu-CAG-2:A_DSL tRNA-Leu-CAG-3:A_DSL tRNA-Leu-CAG-4:A_DSL tRNA-Leu-CAG-6:A_DSL tRNA-Leu-CAG-8:A_DSL tRNA-Leu-CAG-10:A_DSL tDR Isotype(s) Leu tDR Alignment # STOCKHOLM 1.0 tRNA-Leu-CAA-1 -GUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGUUCUGGU-G...................-CGUGGGUUCGAAUCCCACUUCUGACACCA [1] tRNA-Leu-CAA-2 -GUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGUUCUGGU-G...................-CGUGGGUUCAAAUCCCACUUCUGACACCA [2] tRNA-Leu-CAA-3 -GUCAGGAUGGCCGAGC--GGUCUAAGGCGCCAGACUCAAGUUCUGGU-G...................-CGUGGGUUCAAAUCCCACUUCUGACACCA [3] tRNA-Leu-CAA-4 -GUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGUUCUGGU-G...................-CGUGGGUUCAAAUCCCACUUCUGACACCA [4] tRNA-Leu-CAA-5 -GUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGUUCUGGU-G...................-CGUGGGUUCAAAUCCCACUUCUGACACCA [5] tRNA-Leu-CAA-6 -GUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGUUCUGGU-G...................-CGUGGGUUCAAAUCCUACUUCUGACACCA [6] tRNA-Leu-CAA-7 -GUCAGGAUGGCCGAGU--GGUCUGAGGCGCCAGACUCAAGUUCUGGU-G...................-CAUGGGUUCAAAUCCCACUUCUGACACCA [7] tRNA-Leu-CAA-8 -GUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGUUCUGGU-GcguggguucgaaucccacuGCGUGGGUUCGAAUCCCACUUCUGACACCA [8] tRNA-Leu-CAG-1 -GUCAGGAUGGCCGAGC--GGUCUAAGGCGCUGCGUUCAGGUCGCAGU-G...................-CGUGGGUUCGAAUCCCACUUCUGACACCA [9] tRNA-Leu-CAG-2 -GUCAGGAUGGCCGAGC--GGUCUAAGGCGCUGCGUUCAGGUCGCAGU-G...................-CGUGGGUUCGAAUCCCACUUCUGACACCA [10] tRNA-Leu-CAG-3 -GUCAGGAUGGCCGAGC--GGUCUAAGGCGCUGCGUUCAGGUCGCAGU-G...................-CGUGGGUUCAAAUCCCACUUCUGACACCA [11] tRNA-Leu-CAG-4 -GUCAGGAUGGCCGAGC--GGUCUAAGUCGCUGCGUUCAGGUCGCAGU-G...................-CGUGGGUUCGAAUCCCACUUCUGACACCA [12] tRNA-Leu-CAG-6 -GUCAGGAUGGCCGAGC--GGUCUAAGGCGCUGCGUUCAGGUCGCAGU-G...................-CUUGGGUUCGAAUCCCACUUCUGACACCA [13] tRNA-Leu-CAG-8 -GUCAGGAUGGCCGAGC--GGUCUAAGGCGCUGCGUCCAGGUCGCAGU-G...................-CGAGGGUUCGAAUCCCACUUCUGACACCA [14] tRNA-Leu-CAG-10 -GUCAGGAUGGCCGAGC--AGUCUAAGGCGCUGCGUUCAGGUCACAGU-G...................-CGUUGGUUCAAAUCCCACUUCUGACACCA [15] 5019 .GUCAGGAUGGCCGA.................................................................................... [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,...................,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++...................++=====+++++++============++++ // tDR Group 17: 3003 tDR Location tRNA-Val-CAC-12:TE_Z tDR Isotype(s) Val tDR Alignment # STOCKHOLM 1.0 tRNA-Val-CAC-12 -GUUUCUGUAGUAUAGU--GGUU-AUCACGUUCGCCUCACACGCGAAAGGUCCCCGGUUCGAAACCAGGCAGAAACACCA [1] 3003 ................................................................CCAGGCAGAAACACCA [1] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 18: 3004 tDR Location tRNA-Pro-AGG-1:TLE_Z tRNA-Pro-AGG-2:TLE_Z tRNA-Pro-AGG-3:TLE_Z tRNA-Pro-AGG-4:TLE_Z tRNA-Pro-AGG-5:TLE_Z tRNA-Pro-AGG-6:TLE_Z tRNA-Pro-AGG-7:TLE_Z tRNA-Pro-AGG-9:TLE_Z tRNA-Pro-AGG-10:TLE_Z tRNA-Pro-AGG-11:TLE_Z tRNA-Pro-AGG-13:TLE_Z tRNA-Pro-AGG-15:TLE_Z tRNA-Pro-CGG-1:TLE_Z tRNA-Pro-CGG-2:TLE_Z tRNA-Pro-CGG-3:TLE_Z tRNA-Pro-CGG-7:TLE_Z tRNA-Pro-CGG-10:TLE_Z tRNA-Pro-TGG-1:TLE_Z tRNA-Pro-TGG-2:TLE_Z tRNA-Pro-TGG-3:TLE_Z tRNA-Pro-TGG-4:TLE_Z tRNA-Pro-TGG-7:TLE_Z tDR Isotype(s) Pro tDR Alignment # STOCKHOLM 1.0 tRNA-Pro-AGG-1 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUAGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [1] tRNA-Pro-AGG-2 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUAGGGUGCGAGAGGUCCCGGGUUCGAAUCCCGGACGAGCCCCCA [2] tRNA-Pro-AGG-3 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUAGGGUGUGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [3] tRNA-Pro-AGG-4 -GGCUUGUUGGUCUAGG--GGU--AUGAUUCUCGCUUAGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [4] tRNA-Pro-AGG-5 -GGCUCGUUGGUCUAGG--GGUG--UGAUUCUCGCUUAGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [5] tRNA-Pro-AGG-6 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUAGGGUGCGAGAUGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [6] tRNA-Pro-AGG-7 -GGCUCGUUGGUCUAGG--GGU--AUGAUUUUCGCUUAGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [7] tRNA-Pro-AGG-9 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUAGGGUGCGAGAGGUCCCGGGUCCAAAUCCCGGACGAGCCCCCA [8] tRNA-Pro-AGG-10 -GGCUCGUUGGUCUAG---GGUU-AUGAUUCUCGCUUAGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [9] tRNA-Pro-AGG-11 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUAGGGUGCGAGAGAUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [10] tRNA-Pro-AGG-13 -GGCUCGUUGGUCUAGG--GGU--AUAAUUCUCGCUUAGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [11] tRNA-Pro-AGG-15 -GGCUCAUUGGUCUAGG--GGU--AUGAUUCUCGCUUAGGGUGCGAGAGGUCCCAGGUUCAAAUCCCGGACGAGCCCCCA [12] tRNA-Pro-CGG-1 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUCGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [13] tRNA-Pro-CGG-2 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUCGGGUGUGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [14] tRNA-Pro-CGG-3 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCCUCGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [15] tRNA-Pro-CGG-7 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUCGGGUGCGAGAGGUCCCAGGUUCAAAUCCCGGACGAGCCCCCA [16] tRNA-Pro-CGG-10 -GGCUCGUUGGUCUA----GGU--AUGAUUCUCGCUUCGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [17] tRNA-Pro-TGG-1 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUUGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [18] tRNA-Pro-TGG-2 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUUGGGUGUGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [19] tRNA-Pro-TGG-3 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUUGCUUUGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [20] tRNA-Pro-TGG-4 -GGCUCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUUGGGUGCGAGAGGUCCUGGGUUCAAAUCCCGGACGAGCCCCCA [21] tRNA-Pro-TGG-7 -GGCGCGUUGGUCUAGG--GGU--AUGAUUCUCGCUUUGGGUGCGAGAGGUCCCGGGUUCAAAUCCCGGACGAGCCCCCA [22] 3004 ..............................................................AUCCCGGACGAGCCCCCA [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 19: 3015 tDR Location tRNA-Trp-CCA-1:TLE_Z tRNA-Trp-CCA-2:TLE_Z tRNA-Trp-CCA-3:TLE_Z tRNA-Trp-CCA-5:TLE_Z tRNA-Trp-CCA-7:TLE_Z tRNA-Trp-CCA-8:TLE_Z tRNA-Trp-CCA-9:TLE_Z tRNA-Trp-CCA-10:TLE_Z tDR Isotype(s) Trp tDR Alignment # STOCKHOLM 1.0 tRNA-Trp-CCA-1 -GACCUCGUGGCGCAAC--GGU--AGCGCGUCUGACUCCAGAUCAGAAGGUUGCGUGUUCAAAUCACGUCGGGGUCACCA [1] tRNA-Trp-CCA-2 -GACCUCGUAGCGCAAC--GGU--AGCGCGUCUGACUCCAGAUCAGAAGGUUGCGUGUUCAAAUCACGUCGGGGUCACCA [2] tRNA-Trp-CCA-3 -GACCUCGUGGCGCAAC--GGU--AGCGCGUCUGACUCCAGAUCAGAAGGCUGCGUGUUCGAAUCACGUCGGGGUCACCA [3] tRNA-Trp-CCA-5 -GACCUCGUGGCGCAAC--GGU--AGCGCGUCUGACUCCAGAUCAGAAGGUUGCGUAUUCAAAUCACGUCGGGGUCACCA [4] tRNA-Trp-CCA-7 -GACCUCGUGGCGCAAC--GGU--AGCGCGUCUGACUCCAGAUCAGAAGGUUGCAUGUUCAAAUCACGUCGGGGUCACCA [5] tRNA-Trp-CCA-8 -GACCUCGUGGCGCAAC--GGU--AGCGCGUAUGAUUCCAGAUCAGAAGGUUGCGUGUUCAAAUCACGUCGGGGUCACCA [6] tRNA-Trp-CCA-9 -GACCUCGUGGCGCAAC--GGC--AGCGCGUCUGACUCCACAUUAGAAGGUUGCGUGUUCAAAUCACGUCGGGGUCACCA [7] tRNA-Trp-CCA-10 -GACCUCGUGGUGCAAC--GGU--AGCGCGUAUGAUUCCAGAUCAGAAGGUUGCGUGUUCAAAUCACGUCGGGGUCACCA [8] 3015 ..............................................................AUCACGUCGGGGUCACCA [1,2,3,4,5,6,7,8] #=GC SS_cons :(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))):::: #=GC RF +=======++====+++++++++++====+=====++***++=====+++++=====+++++++============++++ // tDR Group 20: 1007,1008 tDR Location tRNA-Ala-TGC-2-1: tRNA-Ala-TGC-2-2: tRNA-Ala-TGC-2-3: tRNA-Ala-TGC-2-4: tRNA-Ala-TGC-2-5: tRNA-Ala-TGC-2-6: tRNA-Ala-TGC-2-7: tRNA-Ala-TGC-2-8: tRNA-Ala-TGC-2-9: tRNA-Ala-TGC-2-10: tRNA-Ala-TGC-2-11: tRNA-Ala-TGC-2-12: tRNA-Ala-TGC-2-13: tRNA-Ala-TGC-2-14: tRNA-Ala-TGC-2-15: tRNA-Ala-TGC-2-16: tRNA-Ala-TGC-2-17: tRNA-Ala-TGC-2-18: tRNA-Ala-TGC-2-19: tRNA-Ala-TGC-2-20: tRNA-Ala-TGC-2-21: tRNA-Ala-TGC-2-22: tRNA-Ala-TGC-2-23: tRNA-Ala-TGC-2-24: tRNA-Ala-TGC-2-25: tRNA-Ala-TGC-2-26: tRNA-Ala-TGC-2-27: tRNA-Ala-TGC-2-28: tRNA-Ala-TGC-2-29: tRNA-Ala-TGC-2-30: tRNA-Ala-TGC-2-31: tRNA-Ala-TGC-2-32: tRNA-Ala-TGC-2-33: tRNA-Ala-TGC-2-34: tRNA-Ala-TGC-2-35: tRNA-Ala-TGC-4-1: tRNA-Ala-TGC-6-1: tRNA-Ala-TGC-7-1: tRNA-Ala-TGC-8-1: tRNA-Ala-TGC-10-1: tRNA-Ala-TGC-10-2: tRNA-Ala-TGC-10-3: tRNA-Ala-TGC-10-4: tRNA-Ala-TGC-10-5: tRNA-Ala-TGC-13-1: tRNA-Ala-TGC-13-2: tRNA-Ala-TGC-13-3: tRNA-Ala-TGC-14-1: tRNA-Ala-TGC-15-1: tDR Isotype(s) Ala tDR Alignment # STOCKHOLM 1.0 tRNA-Ala-TGC-2-1 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [1] tRNA-Ala-TGC-2-2 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [2] tRNA-Ala-TGC-2-3 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGCGGGUCUCUCUUUUUAUGUGCGUGUA [3] tRNA-Ala-TGC-2-4 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [4] tRNA-Ala-TGC-2-5 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [5] tRNA-Ala-TGC-2-6 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUAGGUAUUCUUUUUAUGUGCGUGUAA [6] tRNA-Ala-TGC-2-7 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [7] tRNA-Ala-TGC-2-8 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [8] tRNA-Ala-TGC-2-9 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [9] tRNA-Ala-TGC-2-10 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUGUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [10] tRNA-Ala-TGC-2-11 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [11] tRNA-Ala-TGC-2-12 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [12] tRNA-Ala-TGC-2-13 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [13] tRNA-Ala-TGC-2-14 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [14] tRNA-Ala-TGC-2-15 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [15] tRNA-Ala-TGC-2-16 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [16] tRNA-Ala-TGC-2-17 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [17] tRNA-Ala-TGC-2-18 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [18] tRNA-Ala-TGC-2-19 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [19] tRNA-Ala-TGC-2-20 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [20] tRNA-Ala-TGC-2-21 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [21] tRNA-Ala-TGC-2-22 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [22] tRNA-Ala-TGC-2-23 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUGUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [23] tRNA-Ala-TGC-2-24 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [24] tRNA-Ala-TGC-2-25 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [25] tRNA-Ala-TGC-2-26 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGCGGGUCUCUCUUUUUAUGUGCGUGUA [26] tRNA-Ala-TGC-2-27 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [27] tRNA-Ala-TGC-2-28 GUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGUUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGAAGUGGGUCUCUCUUUUUAUGUGCGUGUA [28] tRNA-Ala-TGC-2-29 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [29] tRNA-Ala-TGC-2-30 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [30] tRNA-Ala-TGC-2-31 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUAGGUAUUCUUUUUAUGUGCGUGUAA [31] tRNA-Ala-TGC-2-32 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [32] tRNA-Ala-TGC-2-33 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUAGGUAUUCUUUUUAUGUGCGUGUAA [33] tRNA-Ala-TGC-2-34 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [34] tRNA-Ala-TGC-2-35 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [35] tRNA-Ala-TGC-4-1 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCACAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [36] tRNA-Ala-TGC-6-1 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACAGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUUUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [37] tRNA-Ala-TGC-7-1 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUUUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [38] tRNA-Ala-TGC-8-1 GGAUGGUUUCGAUCCAUCGACCUCCGCAAAAUAGCUUCAGCCAGGCUUCGGGuGGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAAGCAGGAGCGGGUCUCUCUUUUUAUGUGCGUGUA [39] tRNA-Ala-TGC-10-1 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAAUGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUAGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [40] tRNA-Ala-TGC-10-2 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAAUGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUAGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGAAGUGGGUCUCUCUUUUUAUGUGCUUGUA [41] tRNA-Ala-TGC-10-3 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAAUGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUAGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGAAGUGGGUCUCUCUUUUUAUGUGCGUGUA [42] tRNA-Ala-TGC-10-4 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAAUGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUAGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGAAGUGGGUCUCUCUUUUUAUGUGCUUGUA [43] tRNA-Ala-TGC-10-5 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAAUGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUAGG.UUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGAAGUGGGUCUCUCUUUUUAUGUGCUUGUA [44] tRNA-Ala-TGC-13-1 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCACCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [45] tRNA-Ala-TGC-13-2 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCACCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [46] tRNA-Ala-TGC-13-3 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGG.UUCAAUCACCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [47] tRNA-Ala-TGC-14-1 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUCUUGGGaUUCAAUCCCCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [48] tRNA-Ala-TGC-15-1 UUAUUAUCAAUGUUCAGGCAAUAAGCAAAACGGCUUUGACCAGGCUUUGGGG.GGAUGUAGCUCAGU--GGU--AGAGCGCAUGCUUUGCAUGUAUGAGGUUUUGGG.UUCAAUCACCAGCAUCUCCAACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUUUUUAUGUGCGUGUA [49] 1008 ................................................................................................................................ACCUGGGGCUCUUGAA.................................. [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49] 1007 ................................................................................................................................ACCUGGGGCUCUUGAAGGCAGGAGUGGGUCUCUCUU.............. [1,2,4,5,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,27,29,30,32,34,35,36,37,38,40,45,46,47,48,49] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::((.(((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<._______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................==.=====++====+++++++++++====+=====++***++=====+++++=====.+++++++============+.................................................. // tDR Group 21: 1001 tDR Location tRNA-Gln-CTG-2-5: tRNA-Gln-CTG-2-7: tRNA-Gln-CTG-2-15: tRNA-Gln-CTG-2-17: tRNA-Gln-CTG-3-1: tDR Isotype(s) Gln tDR Mismatches A:+13:C:1 tDR Alignment # STOCKHOLM 1.0 tRNA-Gln-CTG-2-5 CACGACCAUCUACGACACUCACGCUUCCGGAGGCAUGCCGAUCGUGCGUUGGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUGGGAUGGCUUUUCGCAGUCCGCCGCCUUGCCUUCUGCUCUCCCAAAAUCA [1] tRNA-Gln-CTG-2-7 CACGACCAUCUACGACACUCACGCUUCCGGAGGCAUGCCGAUCGUGCGUUGGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUGGGAUGGCUUUUCGCAGUCCGCCGCCUUGCCUUCUGCUCUCCCAAAAUCA [2] tRNA-Gln-CTG-2-15 CACGACCAUCUACGACACUCACGCUUCCGGAGGCAUGCCGAUCGUGCGUUGGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUGGGAUGGCUUUUCGCAGUCCGCCGCCUUGCCUUCUGCUCUCCCAAAAUCA [3] tRNA-Gln-CTG-2-17 CACGACCAUCUACGACACUCACGCUUCCGGAGGCAUGCCGAUCGUGUGUUGGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-UCCGAGUUCAAAUCUCGGUGGAACCUGGGAUGGCUUUUCGCAGUCCGCCGCCUUGCCUUCUGCUCUCCCAAAAUCA [4] tRNA-Gln-CTG-3-1 CACGACCAUCUACGACACUCACGCUUCCGGAGGCAUGCCGAUCGUGCGUUGGUUCCAUGGUGUAAU--GGUU-AGCACUCUGGACUCUGAAUCCAGCGA-ACCGAGUUCAAAUCUCGGUGGAACCUGGGAUGGCUUUUCGCAGUCCGCCGCCUUGCCUUCUGCUCUCCCAAAAUCA [5] 1001 ..............................................................................................................................GGGAUGGCUUUUA..................................... [1,2,3,4,5] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 22: 1002 tDR Location tRNA-Ala-AGC-1-8: tDR Isotype(s) Ala tDR Alignment # STOCKHOLM 1.0 tRNA-Ala-AGC-1-8 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGCGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [1] 1002 ...............................................................................................................................GAGGCGGCUCUUUU................................... [1] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 23: 1003 tDR Location tRNA-Ala-AGC-1-1: tRNA-Ala-AGC-1-2: tRNA-Ala-AGC-1-3: tRNA-Ala-AGC-1-4: tRNA-Ala-AGC-1-5: tRNA-Ala-AGC-1-6: tRNA-Ala-AGC-1-7: tRNA-Ala-AGC-1-9: tRNA-Ala-AGC-1-10: tRNA-Ala-AGC-1-11: tRNA-Ala-AGC-1-12: tRNA-Ala-AGC-1-13: tRNA-Ala-AGC-1-14: tRNA-Ala-AGC-1-15: tRNA-Ala-AGC-1-19: tRNA-Ala-AGC-1-20: tRNA-Ala-AGC-1-21: tRNA-Ala-AGC-1-22: tRNA-Ala-AGC-1-24: tRNA-Ala-AGC-1-25: tRNA-Ala-AGC-1-27: tRNA-Ala-AGC-1-28: tRNA-Ala-AGC-1-29: tRNA-Ala-AGC-1-30: tRNA-Ala-AGC-1-31: tRNA-Ala-AGC-1-32: tRNA-Ala-AGC-1-33: tRNA-Ala-AGC-1-34: tRNA-Ala-AGC-1-35: tRNA-Ala-AGC-1-36: tRNA-Ala-AGC-1-37: tRNA-Ala-AGC-1-38: tRNA-Ala-AGC-1-39: tRNA-Ala-AGC-1-40: tRNA-Ala-AGC-1-41: tRNA-Ala-AGC-3-1: tRNA-Ala-AGC-4-1: tRNA-Ala-AGC-5-1: tRNA-Ala-AGC-6-1: tRNA-Ala-AGC-7-1: tRNA-Ala-AGC-8-1: tRNA-Ala-AGC-9-1: tRNA-Ala-AGC-9-2: tRNA-Ala-AGC-10-1: tRNA-Ala-AGC-11-1: tRNA-Ala-AGC-11-2: tRNA-Ala-AGC-11-3: tRNA-Ala-AGC-11-4: tRNA-Ala-AGC-12-1: tDR Isotype(s) Ala tDR Alignment # STOCKHOLM 1.0 tRNA-Ala-AGC-1-1 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUAUGCUGGCGUUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGACCGGGUGGGCGGGGCUGCAACGUGCUUCUGU [1] tRNA-Ala-AGC-1-2 GCCCAAGUUGAGGUUUGUCAGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGUUUCUGU [2] tRNA-Ala-AGC-1-3 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [3] tRNA-Ala-AGC-1-4 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [4] tRNA-Ala-AGC-1-5 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [5] tRNA-Ala-AGC-1-6 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [6] tRNA-Ala-AGC-1-7 GCCCAAGUUGAGGUUUGUCGGAGGUCCUUUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [7] tRNA-Ala-AGC-1-9 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [8] tRNA-Ala-AGC-1-10 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [9] tRNA-Ala-AGC-1-11 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [10] tRNA-Ala-AGC-1-12 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGAGGGUGGGCGGGGCCGCAACACGCUUCUGU [11] tRNA-Ala-AGC-1-13 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [12] tRNA-Ala-AGC-1-14 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [13] tRNA-Ala-AGC-1-15 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [14] tRNA-Ala-AGC-1-19 NNNNNNNNNNNNNNNNNNNNNNNNNNCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [15] tRNA-Ala-AGC-1-20 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [16] tRNA-Ala-AGC-1-21 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [17] tRNA-Ala-AGC-1-22 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGAGGGUGGGCGGGGCCGCAACACGCUUCUGU [18] tRNA-Ala-AGC-1-24 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [19] tRNA-Ala-AGC-1-25 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCAGCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [20] tRNA-Ala-AGC-1-27 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [21] tRNA-Ala-AGC-1-28 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [22] tRNA-Ala-AGC-1-29 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [23] tRNA-Ala-AGC-1-30 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [24] tRNA-Ala-AGC-1-31 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCAGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [25] tRNA-Ala-AGC-1-32 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCAGCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [26] tRNA-Ala-AGC-1-33 GCCCAAGUUGAGGUUUGUCGGAGGUCCUUUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [27] tRNA-Ala-AGC-1-34 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [28] tRNA-Ala-AGC-1-35 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [29] tRNA-Ala-AGC-1-36 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [30] tRNA-Ala-AGC-1-37 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAAGGCGCUUCUGU [31] tRNA-Ala-AGC-1-38 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [32] tRNA-Ala-AGC-1-39 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCAGCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [33] tRNA-Ala-AGC-1-40 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCGCCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [34] tRNA-Ala-AGC-1-41 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [35] tRNA-Ala-AGC-3-1 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCAAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [36] tRNA-Ala-AGC-4-1 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGUGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [37] tRNA-Ala-AGC-5-1 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCACUGCACCGUGAGGGGGAUUAGCUCACAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [38] tRNA-Ala-AGC-6-1 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUUCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [39] tRNA-Ala-AGC-7-1 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCUGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [40] tRNA-Ala-AGC-8-1 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCACGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [41] tRNA-Ala-AGC-9-1 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUUGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCACUUCUGU [42] tRNA-Ala-AGC-9-2 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGGGCUGGUGCAGCACCGUGAGGGGGAUUUGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCAGGGCCGCAACGCGCUUCUGU [43] tRNA-Ala-AGC-10-1 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAC-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCAGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCACAACGAGCUUCUGU [44] tRNA-Ala-AGC-11-1 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGCUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [45] tRNA-Ala-AGC-11-2 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGCUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [46] tRNA-Ala-AGC-11-3 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGUGCUGGCGCUGCGCCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGCUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCACAACGCGCUUCUGU [47] tRNA-Ala-AGC-11-4 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCGCCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGCUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [48] tRNA-Ala-AGC-12-1 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCACGCGAGAGGUAGCGGGAUCGAUGCCUGCAUCCUCCAGGAGGUGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACACGCUUCUGU [49] 1003 ...............................................................................................................................GAGGUGGCUCUUUU................................... [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 24: 1004 tDR Location tRNA-Ala-AGC-1-17: tRNA-Ala-AGC-1-23: tRNA-Ala-AGC-1-26: tDR Isotype(s) Ala tDR Alignment # STOCKHOLM 1.0 tRNA-Ala-AGC-1-17 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGAGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [1] tRNA-Ala-AGC-1-23 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCAGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGAGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [2] tRNA-Ala-AGC-1-26 GCCCAAGUUGAGGUUUGUCGGAGGUCCUGUGUGCUGGCGCUGCACCGUGAGGGGGAUUAGCUCAAAU-GGU--AGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUCGAUGCCCGCAUCCUCCAGGAGGAGGCUCUUUUCAGAGCGGGUGGGCGGGGCCGCAACGCGCUUCUGU [3] 1004 ...............................................................................................................................GAGGAGGCUCUUUU................................... [1,2,3] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 25: 1005 tDR Location tRNA-Asp-GTC-2-6: tRNA-Leu-CAA-4-1: tRNA-Leu-CAA-4-3: tRNA-Leu-CAA-4-4: tRNA-Leu-CAA-4-5: tRNA-Leu-CAA-4-6: tRNA-Leu-CAA-4-7: tRNA-Leu-CAA-4-8: tRNA-Leu-CAA-4-9: tRNA-Leu-CAA-4-10: tRNA-Leu-CAA-4-12: tRNA-Leu-CAA-4-13: tRNA-Leu-CAA-4-14: tRNA-Leu-CAA-4-15: tRNA-Leu-CAA-4-18: tRNA-Leu-CAA-7-1: tRNA-Leu-CAA-10-1: tDR Isotype(s) Leu tDR Mismatches A:+13:C:1 tDR Alignment # STOCKHOLM 1.0 tRNA-Asp-GTC-2-6 UGGGGCAGAUUUUAUUUCCCUGCAGCGGCUCCUUUAAGGCACAUAGCUAUUCCUCGUUAGUAUAGU--GGUA-AGUAUCCCCGCCUGUCA...........................CGCGGGAGA-CCGGGGUUCGAUUCCCCGACGGGGAGGCAAUCUUUUAUUAAGAAGCAUUUUAUACAAUUUUCUGUUGUAAUCAUAA [1] tRNA-Leu-CAA-4-1 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [2] tRNA-Leu-CAA-4-3 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [3] tRNA-Leu-CAA-4-4 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCGGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [4] tRNA-Leu-CAA-4-5 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [5] tRNA-Leu-CAA-4-6 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCAGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [6] tRNA-Leu-CAA-4-7 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCAGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [7] tRNA-Leu-CAA-4-8 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [8] tRNA-Leu-CAA-4-9 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccagguuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [9] tRNA-Leu-CAA-4-10 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [10] tRNA-Leu-CAA-4-12 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [11] tRNA-Leu-CAA-4-13 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCAGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [12] tRNA-Leu-CAA-4-14 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [13] tRNA-Leu-CAA-4-15 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [14] tRNA-Leu-CAA-4-18 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUAAGGCGCCAGACUCAAGagcgcagcuccuccccaggcuugggauUUCUGGU-G-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [15] tRNA-Leu-CAA-7-1 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCAGCAGGCUUCUGUCAGGAUGGCCGAGU--GGUCUGAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUGGU-G-CAUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [16] tRNA-Leu-CAA-10-1 AUUUAUAUUUAGAAUGUCUCAAUCCCCUCUCGCCAGCCCGGCAGGCUUCUGUCAGGAUGGCCAAGU--GGUCUAAGGCGCCAGACUCAAGagugcagcucuuccccaggcuugggauUUCUG-CUG-CGUGGGUUCAAAUCCCACUUCUGACAAGCGGCUCUUUUCCUCAACGGUAUAUUCUCGCCAUCGUUUCUACCAGCUC [17] 1005 .........................................................................................................................................................AGCGGCUCUUUUA..................................... [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<______..........................._>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***+...........................+=====+++++=====+++++++============+.................................................. // tDR Group 26: 1006 tDR Location tRNA-Cys-GCA-6-4: tRNA-Cys-GCA-6-5: tDR Isotype(s) Cys tDR Mismatches A:+1:G:1 tDR Alignment # STOCKHOLM 1.0 tRNA-Cys-GCA-6-4 CAACCUGUUACAUUGUCUCAUUCUGCACUCUGAAACUCACCAUAUGUGCUGGGGGUAUAGCUCAGU--GGU--AGAGCAUUCGACUGCAGAUCGAGAGGUCCCUGGUUCAAAUCCGGGUGCCCCCUGGGCAGAUGUCAUUUUCCUGGAAUUUCAAUGCAAAGUUUAUUGAAUAUAA [1] tRNA-Cys-GCA-6-5 AAACCUGUUACAUUGUCUCAUUCUGCACUCUGAAACUCACCAUAUGUGCUGGGGGUAUAGCUCAGU--GGU--AGAGCAUUCGACUGCAGAUCGAGAGGUCCCUGGUUCAAAUCCGGGUGCCCCCUGGGCAGAUGUCAUUUUCCUGGAAUUUCAAUGCAAAGUUUAUUGAAUAUAA [2] 1006 ..............................................................................................................................AGGCAGAUGUCAUUUU.................................. [1,2] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 27: 1009 tDR Location tRNA-Phe-GAA-2-1: tRNA-Phe-GAA-8-1: tRNA-Phe-GAA-8-2: tRNA-Phe-GAA-13-1: tDR Isotype(s) Phe tDR Alignment # STOCKHOLM 1.0 tRNA-Phe-GAA-2-1 GGACUGCAGGCCCACGCCUGAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCAAUCCCGGGUUUCGGCAGGUGGAGCCGUGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [1] tRNA-Phe-GAA-8-1 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUGGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGUGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [2] tRNA-Phe-GAA-8-2 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUGGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGUGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [3] tRNA-Phe-GAA-13-1 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAACUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCACUGGUUCAAUCCCGGGUUUCGGCAGGUGGAGCCGUGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [4] 1009 ...............................................................................................................................GUGGAGCCGUGGAUUU................................. [1,2,3,4] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 28: 1010 tDR Location tRNA-Ser-AGA-2-19: tDR Isotype(s) Ser tDR Alignment # STOCKHOLM 1.0 tRNA-Ser-AGA-2-19 GCACUCAUCACCAAGUUAGGGUGUCAACCAGCUUUACUUUGCAGCAUCAUGUAGUCGUGGCCGAGU--GGUU-AAGGCGAUGGACUAGAAAUCCAUU-G-CGCAGGUUCGAAUCCUGCCGACUACGGGUUGCAUUUAUUUACCACUCCUCUCCCUCCAUGGACACAAUGUAGACAC [1] 1010 ..............................................................................................................................GGUUGCAUUUAUUUA................................... [1] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 29: 1011 tDR Location tRNA-Lys-CTT-1-1: tRNA-Lys-CTT-1-2: tRNA-Lys-CTT-1-3: tRNA-Lys-CTT-1-4: tRNA-Lys-CTT-1-5: tRNA-Lys-CTT-1-6: tRNA-Lys-CTT-1-7: tRNA-Lys-CTT-1-8: tRNA-Lys-CTT-1-9: tRNA-Lys-CTT-1-10: tRNA-Lys-CTT-1-12: tRNA-Lys-CTT-1-13: tRNA-Lys-CTT-1-14: tRNA-Lys-CTT-1-15: tRNA-Lys-CTT-1-16: tRNA-Lys-CTT-1-17: tRNA-Lys-CTT-1-18: tRNA-Lys-CTT-1-19: tRNA-Lys-CTT-1-20: tRNA-Lys-CTT-1-21: tRNA-Lys-CTT-1-22: tRNA-Lys-CTT-1-23: tRNA-Lys-CTT-1-24: tRNA-Lys-CTT-1-25: tRNA-Lys-CTT-1-26: tRNA-Lys-CTT-1-28: tRNA-Lys-CTT-1-29: tRNA-Lys-CTT-1-30: tRNA-Lys-CTT-1-31: tRNA-Lys-CTT-1-32: tRNA-Lys-CTT-7-1: tRNA-Lys-CTT-8-1: tRNA-Lys-CTT-9-1: tRNA-Lys-CTT-11-1: tRNA-Lys-CTT-13-1: tRNA-Lys-CTT-13-2: tRNA-Lys-CTT-14-1: tRNA-Lys-CTT-18-1: tRNA-Lys-CTT-21-1: tRNA-Lys-CTT-21-2: tRNA-Lys-TTT-1-1: tDR Isotype(s) Lys tDR Alignment # STOCKHOLM 1.0 tRNA-Lys-CTT-1-1 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [1] tRNA-Lys-CTT-1-2 AAAGGAAAAGGAAAGGCCGGCACCAGGGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [2] tRNA-Lys-CTT-1-3 AAAGGAAAAGGAAAGGCCGGCACCAGGGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [3] tRNA-Lys-CTT-1-4 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [4] tRNA-Lys-CTT-1-5 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACACCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [5] tRNA-Lys-CTT-1-6 AAAGGAAAAGGAAAGGCCGGCACCAGCACUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [6] tRNA-Lys-CTT-1-7 AAAGGAAAAUGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAAUGCAAACUAG [7] tRNA-Lys-CTT-1-8 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [8] tRNA-Lys-CTT-1-9 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCAGGAAAAACCGCAACGCAAACUAG [9] tRNA-Lys-CTT-1-10 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACACCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [10] tRNA-Lys-CTT-1-12 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACUGCAACGCAAACUAG [11] tRNA-Lys-CTT-1-13 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACACCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [12] tRNA-Lys-CTT-1-14 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [13] tRNA-Lys-CTT-1-15 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [14] tRNA-Lys-CTT-1-16 AAAGGAAAAGGAAAGGCUGGCACCAGCGCUCUGCCAAACGCUAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [15] tRNA-Lys-CTT-1-17 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [16] tRNA-Lys-CTT-1-18 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAGCGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [17] tRNA-Lys-CTT-1-19 AAAGGAAAAGGAAAGGCUGGCACCAGCGCUCUGCCAAACGCUAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [18] tRNA-Lys-CTT-1-20 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [19] tRNA-Lys-CTT-1-21 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAGCGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [20] tRNA-Lys-CTT-1-22 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [21] tRNA-Lys-CTT-1-23 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAAUGCAAACUAG [22] tRNA-Lys-CTT-1-24 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [23] tRNA-Lys-CTT-1-25 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAAUGCAAACUAG [24] tRNA-Lys-CTT-1-26 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [25] tRNA-Lys-CTT-1-28 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [26] tRNA-Lys-CTT-1-29 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [27] tRNA-Lys-CTT-1-30 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [28] tRNA-Lys-CTT-1-31 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [29] tRNA-Lys-CTT-1-32 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [30] tRNA-Lys-CTT-7-1 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGGGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [31] tRNA-Lys-CTT-8-1 AAAGGAAAAGGAAAGGCCGGCACCAGCACUCUGCCAAGCGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GAU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [32] tRNA-Lys-CTT-9-1 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCAUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [33] tRNA-Lys-CTT-11-1 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGGGACUCUUAAUCUCAGUGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCUUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [34] tRNA-Lys-CTT-13-1 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAAUGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGCUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [35] tRNA-Lys-CTT-13-2 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAAUGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGCUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [36] tRNA-Lys-CTT-14-1 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUCGUGGGUUCGAGCCACACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [37] tRNA-Lys-CTT-18-1 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGCCUCUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [38] tRNA-Lys-CTT-21-1 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGCCUCUUAAUCUCAGGGUCGUGGAUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [39] tRNA-Lys-CTT-21-2 GCAGUUCCUCCAUUCCCUUAUAAGAAAGGAGCAGCCUGGCCAGCGUGGUUGCCCGGCUAGCUCAGUC-GGU--AGAGCAUGAGCCUCUUAAUCUCAGGGUCGUGGAUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [40] tRNA-Lys-TTT-1-1 GAGGGCAAAGGAAAGGCCGGCACCAGCGCUCUGCCACACACCAGCGGGUUGCCCGGCUAGCUCAGUU-GGU--AGAGCAUGAGAUUUUUAAUCUCAGGGUCGUGGGUUCGAGCCCCACGUUGGGCGGCGUGCUCACCUUUUCUUGGCCGAGCGGGAAAAACCGUAACGCAAACUAG [41] 1011 ..............................................................................................................................GCGUGCUCACCUUU.................................... [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 30: 1012 tDR Location tRNA-Lys-CTT-6-1: tDR Isotype(s) Lys tDR Alignment # STOCKHOLM 1.0 tRNA-Lys-CTT-6-1 AAAGGAAAAGGAAAGGCCGGCACCAGCGCUCUGCCAAACGCCAGCGGGUUGCCCGGCUAGCUCAGUU-GGU--AGAGCAUGAGACUCUUAAUCUCAGGGUUGUGGGUUCGAGCCCCACGUUGGGCGGCAUGCUCACCUUUUCCUGGCCGAGCGGGAAAAACCGCAACGCAAACUAG [1] 1012 ..............................................................................................................................GCAUGCUCACCUUUU................................... [1] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 31: 1013 tDR Location tRNA-Arg-CCT-2-1: tRNA-Arg-CCT-2-2: tRNA-Arg-CCT-2-3: tRNA-Arg-CCT-2-4: tRNA-Arg-CCT-2-5: tRNA-Arg-CCT-2-6: tRNA-Arg-CCT-2-7: tRNA-Arg-CCT-2-8: tRNA-Arg-CCT-2-10: tRNA-Arg-CCT-2-11: tRNA-Arg-CCT-2-12: tRNA-Arg-CCT-2-13: tRNA-Arg-CCT-2-14: tRNA-Arg-CCT-2-15: tRNA-Arg-CCT-2-16: tRNA-Arg-CCT-2-17: tRNA-Arg-CCT-2-18: tRNA-Arg-CCT-2-19: tRNA-Arg-CCT-2-20: tRNA-Arg-CCT-2-22: tRNA-Arg-CCT-2-23: tRNA-Arg-CCT-2-24: tRNA-Arg-CCT-4-1: tRNA-Arg-CCT-5-1: tRNA-Arg-CCT-6-1: tRNA-Arg-CCT-6-2: tDR Isotype(s) Arg tDR Alignment # STOCKHOLM 1.0 tRNA-Arg-CCT-2-1 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [1] tRNA-Arg-CCT-2-2 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [2] tRNA-Arg-CCT-2-3 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [3] tRNA-Arg-CCT-2-4 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [4] tRNA-Arg-CCT-2-5 UUUUUUGAGUACCUGACAGAGAACAAUAAUCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [5] tRNA-Arg-CCT-2-6 UUUUUUGAGUACCUGACAGAGAACAAUAAUCCACAAGCUCAGCUAAGGGUGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [6] tRNA-Arg-CCT-2-7 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [7] tRNA-Arg-CCT-2-8 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [8] tRNA-Arg-CCT-2-10 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [9] tRNA-Arg-CCT-2-11 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [10] tRNA-Arg-CCT-2-12 UUUUUUGAGUACCUGACAGAGAACAAUAAUCCACAAGCUCAGCUAAGGGUGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [11] tRNA-Arg-CCT-2-13 UUUUUUGAGUACCUGACAGAGAACAAUAAUCCACAAGCUCAGCUAAGGGUGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [12] tRNA-Arg-CCT-2-14 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [13] tRNA-Arg-CCT-2-15 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [14] tRNA-Arg-CCT-2-16 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAGUC [15] tRNA-Arg-CCT-2-17 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [16] tRNA-Arg-CCT-2-18 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [17] tRNA-Arg-CCT-2-19 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [18] tRNA-Arg-CCT-2-20 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [19] tRNA-Arg-CCT-2-22 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [20] tRNA-Arg-CCT-2-23 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [21] tRNA-Arg-CCT-2-24 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [22] tRNA-Arg-CCT-4-1 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-ACGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [23] tRNA-Arg-CCT-5-1 UUUUUUGAGUACCUGACAGAGAACAAUAAGCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUAAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUGGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [24] tRNA-Arg-CCT-6-1 UUUUUUGAGUACCUGACAGAGAACAAUAAUCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUCAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [25] tRNA-Arg-CCT-6-2 UUUUUUGAGUACCUGACAGAGAACAAUAAUCCACAAGCUCAGCUAAGGGCGCCCCAGUGGCCUCAU--GGAU-AAGGCACUGGCCUCCUAAGCCAGGGAUUGUGGGUUCGAGUCCCAUCUGGGGUACUCACGGUGCAUCCUUUAUGUAAAGUGGAUUGGAGGAGACGGCGGCAUUC [26] 1013 ...............................................................................................................................UCACGGUGCAUCCUUU................................. [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 32: 1014 tDR Location tRNA-Phe-GAA-1-16: tDR Isotype(s) Phe tDR Alignment # STOCKHOLM 1.0 tRNA-Phe-GAA-1-16 UACAUUUAGUUACGUCAUAACAGACACCGGUGCCCGGUACCGACACGGCAGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGAAGCUGGCUGCACUUUUUGUUUUAAAGCCUCAUAUAAGCGCAGGGCUGA [1] 1014 ...............................................................................................................................AAGCUGGCUGCACUUUU................................ [1] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 33: 1015 tDR Location tRNA-Phe-GAA-1-9: tDR Isotype(s) Phe tDR Alignment # STOCKHOLM 1.0 tRNA-Phe-GAA-1-9 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAUCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCAGAUUUUGAGAGCGUUUUAACUAGGUGCGAUGAAGGCCA [1] 1015 ...............................................................................................................................GUGGAGCCGCAGAUUUU................................ [1] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 34: 1016 tDR Location tRNA-Phe-AAA-1-1: tRNA-Phe-GAA-1-2: tRNA-Phe-GAA-1-3: tRNA-Phe-GAA-1-4: tRNA-Phe-GAA-1-5: tRNA-Phe-GAA-1-6: tRNA-Phe-GAA-1-7: tRNA-Phe-GAA-1-8: tRNA-Phe-GAA-1-10: tRNA-Phe-GAA-1-11: tRNA-Phe-GAA-1-12: tRNA-Phe-GAA-1-13: tRNA-Phe-GAA-1-14: tRNA-Phe-GAA-1-15: tRNA-Phe-GAA-1-23: tRNA-Phe-GAA-1-25: tRNA-Phe-GAA-1-26: tRNA-Phe-GAA-1-27: tRNA-Phe-GAA-1-28: tRNA-Phe-GAA-1-29: tRNA-Phe-GAA-1-30: tRNA-Phe-GAA-1-31: tRNA-Phe-GAA-1-32: tRNA-Phe-GAA-1-33: tRNA-Phe-GAA-1-35: tRNA-Phe-GAA-1-36: tRNA-Phe-GAA-1-37: tRNA-Phe-GAA-1-38: tRNA-Phe-GAA-1-39: tRNA-Phe-GAA-1-40: tRNA-Phe-GAA-1-41: tRNA-Phe-GAA-1-42: tRNA-Phe-GAA-1-43: tRNA-Phe-GAA-1-44: tRNA-Phe-GAA-1-45: tRNA-Phe-GAA-1-46: tRNA-Phe-GAA-3-1: tRNA-Phe-GAA-4-1: tRNA-Phe-GAA-6-1: tRNA-Phe-GAA-6-2: tRNA-Phe-GAA-7-1: tRNA-Phe-GAA-9-1: tRNA-Phe-GAA-11-1: tRNA-Phe-GAA-11-2: tRNA-Phe-GAA-12-1: tRNA-Phe-GAA-13-2: tDR Isotype(s) Phe tDR Alignment # STOCKHOLM 1.0 tRNA-Phe-AAA-1-1 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUAAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [1] tRNA-Phe-GAA-1-2 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [2] tRNA-Phe-GAA-1-3 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [3] tRNA-Phe-GAA-1-4 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [4] tRNA-Phe-GAA-1-5 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [5] tRNA-Phe-GAA-1-6 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [6] tRNA-Phe-GAA-1-7 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [7] tRNA-Phe-GAA-1-8 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [8] tRNA-Phe-GAA-1-10 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [9] tRNA-Phe-GAA-1-11 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUUCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [10] tRNA-Phe-GAA-1-12 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [11] tRNA-Phe-GAA-1-13 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [12] tRNA-Phe-GAA-1-14 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [13] tRNA-Phe-GAA-1-15 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGACUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [14] tRNA-Phe-GAA-1-23 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [15] tRNA-Phe-GAA-1-25 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [16] tRNA-Phe-GAA-1-26 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [17] tRNA-Phe-GAA-1-27 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGACUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [18] tRNA-Phe-GAA-1-28 ACUGCAGGCCCACGCCUUAGCAGGGCGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [19] tRNA-Phe-GAA-1-29 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [20] tRNA-Phe-GAA-1-30 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGACUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [21] tRNA-Phe-GAA-1-31 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [22] tRNA-Phe-GAA-1-32 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [23] tRNA-Phe-GAA-1-33 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [24] tRNA-Phe-GAA-1-35 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [25] tRNA-Phe-GAA-1-36 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [26] tRNA-Phe-GAA-1-37 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [27] tRNA-Phe-GAA-1-38 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [28] tRNA-Phe-GAA-1-39 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [29] tRNA-Phe-GAA-1-40 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [30] tRNA-Phe-GAA-1-41 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [31] tRNA-Phe-GAA-1-42 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [32] tRNA-Phe-GAA-1-43 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [33] tRNA-Phe-GAA-1-44 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGGUA [34] tRNA-Phe-GAA-1-45 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGUUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [35] tRNA-Phe-GAA-1-46 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [36] tRNA-Phe-GAA-3-1 CGUAUUGCUCCCCCUGGGGAGAAAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUUGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [37] tRNA-Phe-GAA-4-1 GGACUGCAGGCCCACGCCUGAGCAGGGCACUUGCCGCCGGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCAGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [38] tRNA-Phe-GAA-6-1 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGCCUGCAGCUGUGCCAAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [39] tRNA-Phe-GAA-6-2 GGACUGCAGGCCCACGCCUUAGCAGGGUGCUUGCCGCCGGCUGCAGCUGUGCCAAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [40] tRNA-Phe-GAA-7-1 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCAGCUGCAGCUGUGCCGAAAUAGCUCAGUU-GGG--AGAGUGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [41] tRNA-Phe-GAA-9-1 GGACUGCAGGCCCAGGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCAAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCAGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [42] tRNA-Phe-GAA-11-1 NNNNNNNNNNNNNNNNNNNNNNNNNNNCGCUUGCCGCCGGCUGCAGCUGUGCCGCAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [43] tRNA-Phe-GAA-11-2 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAGCUGUGCCGCAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUCGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [44] tRNA-Phe-GAA-12-1 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCACCGGCUGCAGCUGUGCCGAAAUGGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCCCUGGUUUGAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [45] tRNA-Phe-GAA-13-2 GGACUGCAGGCCCACGCCUUAGCAGGGCGCUUGCCGCCGGCUGCAACUGUGCCGAAAUAGCUCAGUU-GGG--AGAGCGUUAGACUGAAGAUCUAAAGGUCACUGGUUCAAUCCCGGGUUUCGGCAGGUGGAGCCGCGGAUUUUGAGAGCGUUUUAACUAGGCGCGAUGAAGGCCA [46] 1016 ...............................................................................................................................GUGGAGCCGCGGAUUUU................................ [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 35: 1017 tDR Location tRNA-Gly-GCC-1-2: tRNA-Gly-GCC-1-6: tRNA-Gly-GCC-1-8: tRNA-Gly-GCC-1-10: tRNA-Gly-GCC-1-11: tRNA-Gly-GCC-1-12: tRNA-Gly-GCC-1-14: tRNA-Gly-GCC-1-16: tRNA-Gly-GCC-1-18: tRNA-Gly-GCC-1-20: tRNA-Gly-GCC-1-22: tRNA-Gly-GCC-1-26: tRNA-Gly-GCC-1-28: tRNA-Gly-GCC-1-30: tRNA-Gly-GCC-1-32: tRNA-Gly-GCC-1-34: tRNA-Gly-GCC-1-36: tRNA-Gly-GCC-1-38: tRNA-Gly-GCC-1-41: tRNA-Gly-GCC-1-43: tRNA-Gly-GCC-1-44: tRNA-Gly-GCC-1-45: tRNA-Gly-GCC-1-52: tRNA-Gly-GCC-1-54: tRNA-Gly-GCC-1-56: tRNA-Gly-GCC-1-58: tRNA-Gly-GCC-1-60: tRNA-Gly-GCC-1-62: tRNA-Gly-GCC-1-64: tRNA-Gly-GCC-1-66: tRNA-Gly-GCC-1-67: tRNA-Gly-GCC-1-69: tRNA-Gly-GCC-1-71: tRNA-Gly-GCC-1-72: tRNA-Gly-GCC-1-74: tRNA-Gly-GCC-6-1: tRNA-Gly-GCC-8-1: tRNA-Gly-GCC-10-1: tRNA-Gly-GCC-12-1: tRNA-Gly-TCC-1-1: tDR Isotype(s) Gly tDR Alignment # STOCKHOLM 1.0 tRNA-Gly-GCC-1-2 GUCUGAGGGAGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [1] tRNA-Gly-GCC-1-6 GUCUGAGGGAGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [2] tRNA-Gly-GCC-1-8 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAAGGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [3] tRNA-Gly-GCC-1-10 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [4] tRNA-Gly-GCC-1-11 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACAGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [5] tRNA-Gly-GCC-1-12 GUCUGAGGGAGCCUCGUGGGAAUCUGAGCAGCAACUGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [6] tRNA-Gly-GCC-1-14 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [7] tRNA-Gly-GCC-1-16 GUCUGAGGGAGCCUCGUGGGAAUCUGGGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [8] tRNA-Gly-GCC-1-18 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [9] tRNA-Gly-GCC-1-20 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [10] tRNA-Gly-GCC-1-22 GUCUGAGGGAGCCUCGUGGGAAUCUGAGCAGCAACUGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [11] tRNA-Gly-GCC-1-26 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCUAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [12] tRNA-Gly-GCC-1-28 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [13] tRNA-Gly-GCC-1-30 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [14] tRNA-Gly-GCC-1-32 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [15] tRNA-Gly-GCC-1-34 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUUGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGCCGCGCUC [16] tRNA-Gly-GCC-1-36 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACAGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [17] tRNA-Gly-GCC-1-38 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACAGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [18] tRNA-Gly-GCC-1-41 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [19] tRNA-Gly-GCC-1-43 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [20] tRNA-Gly-GCC-1-44 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [21] tRNA-Gly-GCC-1-45 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACAGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [22] tRNA-Gly-GCC-1-52 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAAAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [23] tRNA-Gly-GCC-1-54 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [24] tRNA-Gly-GCC-1-56 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [25] tRNA-Gly-GCC-1-58 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAAAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [26] tRNA-Gly-GCC-1-60 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [27] tRNA-Gly-GCC-1-62 GUCUGAGGGAGCCUCGUGGGAAUCUGGGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [28] tRNA-Gly-GCC-1-64 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [29] tRNA-Gly-GCC-1-66 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [30] tRNA-Gly-GCC-1-67 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [31] tRNA-Gly-GCC-1-69 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [32] tRNA-Gly-GCC-1-71 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [33] tRNA-Gly-GCC-1-72 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGAGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [34] tRNA-Gly-GCC-1-74 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUUGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGCCGCGCUC [35] tRNA-Gly-GCC-6-1 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGCGG-CCUGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [36] tRNA-Gly-GCC-8-1 GUCUGAGCACGCCUCGUGGCAAUCUGAGUAGCAGUGGCACGGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCACCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [37] tRNA-Gly-GCC-10-1 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUUCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [38] tRNA-Gly-GCC-12-1 GUCUGAGGGCGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGGCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [39] tRNA-Gly-TCC-1-1 GUCUGAGGGAGCCUCGUGGGAAUCUGAGUAGCAACGGCAUAGCGUGCAUAGCAUUGGUGGUUCAGU--GGU--CGAAUUCUCGCCUUCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCAAGAGCUGCGUUUUGCCAGGGGUUCCCCACUAGAGCCUUCCCGGCGCGCUC [40] 1017 ..............................................................................................................................AGAGCUGCGUUUU..................................... [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. // tDR Group 36: 1018 tDR Location tRNA-Gly-GCC-1-1: tRNA-Gly-GCC-1-3: tRNA-Gly-GCC-1-5: tRNA-Gly-GCC-1-7: tRNA-Gly-GCC-1-9: tRNA-Gly-GCC-1-13: tRNA-Gly-GCC-1-15: tRNA-Gly-GCC-1-17: tRNA-Gly-GCC-1-19: tRNA-Gly-GCC-1-21: tRNA-Gly-GCC-1-23: tRNA-Gly-GCC-1-25: tRNA-Gly-GCC-1-27: tRNA-Gly-GCC-1-29: tRNA-Gly-GCC-1-31: tRNA-Gly-GCC-1-33: tRNA-Gly-GCC-1-35: tRNA-Gly-GCC-1-37: tRNA-Gly-GCC-1-39: tRNA-Gly-GCC-1-40: tRNA-Gly-GCC-1-42: tRNA-Gly-GCC-1-46: tRNA-Gly-GCC-1-47: tRNA-Gly-GCC-1-49: tRNA-Gly-GCC-1-50: tRNA-Gly-GCC-1-51: tRNA-Gly-GCC-1-53: tRNA-Gly-GCC-1-55: tRNA-Gly-GCC-1-57: tRNA-Gly-GCC-1-59: tRNA-Gly-GCC-1-61: tRNA-Gly-GCC-1-63: tRNA-Gly-GCC-1-65: tRNA-Gly-GCC-1-68: tRNA-Gly-GCC-1-70: tRNA-Gly-GCC-1-73: tRNA-Gly-GCC-5-1: tRNA-Gly-GCC-7-1: tRNA-Gly-GCC-9-1: tRNA-Gly-GCC-11-1: tRNA-Gly-GCC-13-1: tRNA-Gly-GCC-15-1: tDR Isotype(s) Gly tDR Alignment # STOCKHOLM 1.0 tRNA-Gly-GCC-1-1 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [1] tRNA-Gly-GCC-1-3 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [2] tRNA-Gly-GCC-1-5 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [3] tRNA-Gly-GCC-1-7 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCUGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [4] tRNA-Gly-GCC-1-9 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [5] tRNA-Gly-GCC-1-13 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [6] tRNA-Gly-GCC-1-15 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [7] tRNA-Gly-GCC-1-17 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUACCCGAG [8] tRNA-Gly-GCC-1-19 GUUCUGUGCUGUUGGUCACGUCAAUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [9] tRNA-Gly-GCC-1-21 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [10] tRNA-Gly-GCC-1-23 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [11] tRNA-Gly-GCC-1-25 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [12] tRNA-Gly-GCC-1-27 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [13] tRNA-Gly-GCC-1-29 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [14] tRNA-Gly-GCC-1-31 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [15] tRNA-Gly-GCC-1-33 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [16] tRNA-Gly-GCC-1-35 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCUAACCGAGGCAGCUUU [17] tRNA-Gly-GCC-1-37 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [18] tRNA-Gly-GCC-1-39 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [19] tRNA-Gly-GCC-1-40 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [20] tRNA-Gly-GCC-1-42 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [21] tRNA-Gly-GCC-1-46 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [22] tRNA-Gly-GCC-1-47 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [23] tRNA-Gly-GCC-1-49 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [24] tRNA-Gly-GCC-1-50 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [25] tRNA-Gly-GCC-1-51 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [26] tRNA-Gly-GCC-1-53 GUUCUGUGCUGUUGGUCACGUCAGUACGUACAGUUCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [27] tRNA-Gly-GCC-1-55 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [28] tRNA-Gly-GCC-1-57 GUUCUGUGCUGUUGGUCACGUCAGUAUGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [29] tRNA-Gly-GCC-1-59 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [30] tRNA-Gly-GCC-1-61 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [31] tRNA-Gly-GCC-1-63 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUACCCGAG [32] tRNA-Gly-GCC-1-65 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [33] tRNA-Gly-GCC-1-68 UGGACUUGUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [34] tRNA-Gly-GCC-1-70 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [35] tRNA-Gly-GCC-1-73 GUUCUGUGCUGUUGGUCACGUCAGUAUGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [36] tRNA-Gly-GCC-5-1 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGG--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [37] tRNA-Gly-GCC-7-1 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCACCUGCCAUGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [38] tRNA-Gly-GCC-9-1 CUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCAGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [39] tRNA-Gly-GCC-11-1 GUUCUGUGCUGUUGGUCACGUCAGUACGCAAAGUCCGGCGGCCGGCCGUGGCAUUGGUUGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [40] tRNA-Gly-GCC-13-1 GUUCUGUGCUGUUGGUCACGUCAGUACGCACAGUCCGGCGGCCGGCCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCCGGGUUCGAUUCCCUGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUCGUGCCCCGCCGCUAACCGAG [41] tRNA-Gly-GCC-15-1 GUUCUGUGCUGUUGGUCACGUUGGUACGCACAGUCCGGCGGCUGACCGUGGCAUUGGUGGUUCAGU--GGU--AGAAUUCUCGCCUGCCACGCGGGAGG-CCUGGGUUCGAUUCCUGGCCAAUGCACCCCUCGGCUUUCUUUUCUUCAAAAGCCUUGUGCCCCGCCGCUAAUCGAG [42] 1018 ..............................................................................................................................CCCCUCGGCUUUCUUU.................................. [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42] #=GC SS_cons ::::::::::::::::::::::::::::::::::::::::::::::::::(((((((,,<<<<___________>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>)))))))::::::::::::::::::::::::::::::::::::::::::::::::::: #=GC RF ..................................................=======++====+++++++++++====+=====++***++=====+++++=====+++++++============+.................................................. //